| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3480 |
|---|
| Symbol | |
|---|
| ID | 5159303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009469 |
|---|
| Strand | + |
|---|
| Start bp | 9651 |
|---|
| End bp | 11534 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640538792 |
|---|
| Product | anaerobic ribonucleoside triphosphate reductase |
|---|
| Protein accession | YP_001220225 |
|---|
| Protein GI | 148243987 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.308899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGATA CAGCGGTTGT AGGGCGCGGA TTTGCCCAGC GGGTAACCGA GGGTTTTGCT
TCGCAAAACC TCGTCGATCC CATTGCCACA CTTGAGGAAT ACCTCAATCG TGAAGACTGG
CGGGTTAAGG CCAATGCCAA CCAGAGCTAC TCGCTTGGCG GATTGATTCT TCACGGCGCG
GCAAAGCTCG TTGCCAATTA CTGGCTCGAT CATATTTATC CACCTGAGGT CGGCCGCGCC
CATCGGGAGG CTGACCTCCA TATCCACGAT CTGGACATGC TTGCTGGCTA TTGCGCCGGC
TGGTCCCTAC GCACATTGCT CGTGGAAGGC TTCAACGGCG TCGCGGATCG TGTCGAGGCG
TCGCCGCCGA GACACCTTTC AAGCGCGGTC GGCCAAATGG TGAATTTCCT GGGCACAATG
CAGAATGAGT GGGCCGGAGC ACAGGCATTC AGTTCTTTTG ACACCTATCT CGCGCCGTTC
GTGCGCAAGG ATGGTCTTTC CTATGCCGAG GTTCGGCAGA ATATCCAGGA ATTCATCTAC
AACCTCAACG TTCCATCCCG CTGGGGAAGC CAGACGCCAT TCACCAATAT TACGTTTGAC
TGGGTATGTC CCAAGGATCT CCGTGATCAG ATACCCCTGA TTGGGGGCAA TGAAATGCCC
TTCCGCTACG GCGATCTGCA GGCGGAAATG GACATGATAA ACCACGCCTA TATCGAGGTG
ATGAGTGCCG GTGATGCCAA CGGCCGCGTC TTCACCTTCC CAATCCCGAC CTATAATATC
ACGCCAGATT TTGATTGGGA TTCGGAGAAC GCCGAACGTC TTTTCGCAAT GACCGCGAAA
TATGGATTGC CCTATTTTCA GAATTTTCTG AACTCCGATC TCGAGCCCCA TATGGTGCGC
TCGATGTGCT GCCGACTGCA GCTCGACCTG CGCGAATTGC TCAAGCGCGG TAACGGCCTG
TTCGGATCAG CCGAACAGAC CGGATCGATC GGGGTCGTGA CGATCAACTG TGCACGGCTC
GGCTTTCAAC ACAGGGGTAA TCGTTCAAGT CTCTTTGAGA GGCTCGATGC GTTGCTTGCG
CATGCATGCG ACAGCCTGGA GATCAAGCGG CAAGTGATCG GGCAATATCT CGATGCCGGT
CTGTTTCCCT ATTCTAAACG CTATCTCGGA ACCCTGCGCA ATCATTTTTC GACGATCGGC
GTCAATGGAA TCAACGAAAT GATCCGCAAT TTTACGGCGG ATACAGACGA CATAACGACG
CCGGCGGGAC ATCGGATGGC CTGTGACCTG CTTGACCATA TTCGGGCCAA GATCATCGGC
TTCCAGGAAC AGACCGGCCA TCTCTACAAT CTTGAAGCAA CGCCAGCTGA AGGAACCACC
TATCGCTTTG CGAAAGAAGA CCTGCGCCGA TATCCGGAAA TTCTTCAGGC AGGTACGCCG
GACAAGCCCT ATTACACAAA TTCATCACAG TTGCCTGTCG GGTTTACCGA AGATCCTTTC
GAGGCGCTTA CCCGTCAGGA TGAACTGCAG GGTAAATATA CCGGCGGCAC GGTTCTGCAT
CTCTATCTCG GCGAACAGAT CTCTTCCTCT GCGGCCTGCC GAGACCTGGT GCGGCGGGCA
CTGACGCGCT TCCGGCTACC CTACCTCACC GTAACCCCGA CCTTTTCTGT TTGTCCGGTG
CACGGCTATC TTCCAGGCGC ACATCATCAC TGTCCGCGCT GCGCCGCTGA AGAGCCAGCC
ACAATCCCAC GCGTGTGTGA GGTCTGGACG CGTGTGATGG GTTATCATCG TCCGGTATCC
TCGTTTAATA TCGGCAAACA GAGCGAATTC ATCGAACGGC GGTTTTTCGT CGAACCCAGA
GCCATGTGCC ATGCCACAGC CTGA
|
|---|
| Protein sequence | MCDTAVVGRG FAQRVTEGFA SQNLVDPIAT LEEYLNREDW RVKANANQSY SLGGLILHGA
AKLVANYWLD HIYPPEVGRA HREADLHIHD LDMLAGYCAG WSLRTLLVEG FNGVADRVEA
SPPRHLSSAV GQMVNFLGTM QNEWAGAQAF SSFDTYLAPF VRKDGLSYAE VRQNIQEFIY
NLNVPSRWGS QTPFTNITFD WVCPKDLRDQ IPLIGGNEMP FRYGDLQAEM DMINHAYIEV
MSAGDANGRV FTFPIPTYNI TPDFDWDSEN AERLFAMTAK YGLPYFQNFL NSDLEPHMVR
SMCCRLQLDL RELLKRGNGL FGSAEQTGSI GVVTINCARL GFQHRGNRSS LFERLDALLA
HACDSLEIKR QVIGQYLDAG LFPYSKRYLG TLRNHFSTIG VNGINEMIRN FTADTDDITT
PAGHRMACDL LDHIRAKIIG FQEQTGHLYN LEATPAEGTT YRFAKEDLRR YPEILQAGTP
DKPYYTNSSQ LPVGFTEDPF EALTRQDELQ GKYTGGTVLH LYLGEQISSS AACRDLVRRA
LTRFRLPYLT VTPTFSVCPV HGYLPGAHHH CPRCAAEEPA TIPRVCEVWT RVMGYHRPVS
SFNIGKQSEF IERRFFVEPR AMCHATA
|
|---|
| |