Gene Acry_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3320 
Symbol 
ID5159150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand+ 
Start bp33797 
End bp34759 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID640538641 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001220074 
Protein GI148243835 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.118981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGATC AGGCGCCGGG TCTGCCGCCG CCGCGACCCA TTCCAATTCG TGAACGCTCA 
TCTATCCTGT TTCTCGAGCG CGGACAGCTT GACGTAATCG ATGGGAGCTT TGTTGTCGTC 
GACCAGCGTG GCATTCGGAC CGTAATTCCG GTCGGCGGCA TTACATGCCT GATGCTGGAG 
CCAGGCACAC GTGTAAGCCA TGCCGCTGTT TGCCTAGCTG CACGAGCGGG CACATTACTC 
ATCTGGGTTG GAGAGGCTGG TGTGCGCCTC TACGCTGCCG GCCAGCCGGG TGGTGCGCGG 
TCCGACCGGC TACTCTATCA GGCACGACTT GCGCTCGATG ATGAGGCTCG TCTCCGTGTC 
GTACGAAGAA TGTATTCTAT CCGTTTTCAG GAGGAGCCGC CTCAACGCCG CTCTGTCGAT 
CAACTGCGCG GCATTGAGGG CGTCCGCGTG CGGGAGCTCT ATAAGCTGAT GGCCCAGCGC 
CATGGCGTCT CCTGGGCCGG GCGGCGTTAC GACCCCCAGA ACTGGGGTGG TGCTGATCTT 
GTCAATCGTT GTCTATCTGC TGCGACAGCT GCCCTATACG GGATCTCGGA GGCGGCAATC 
CTGGCCGCCG GGTATGCGCC GGCGATCGGC TTTTTACATA GTGGCAAGCC GCAAAGCTTT 
GTTTATGACA TTGCGGATCT CTTCAAGTTC GAAACGGTCG TGCCGGAGGC ATTCAAGGTA 
GTGGCGGCAG TGCAATCTGG ACGTGGACAG ATTGATGGGA TGGCGATCGG AGAACCTGTC 
GGCGCGGTCC GGCGGCGCTG CCGCGATGCG TTCCGCCGCA CAAATGTACT CGCACGCATC 
ATTCCCGCTA TCGAGGATGT GTTGGCAGCC GGCGGCTTGG CAGTGCCAGA GGCGCCCGAA 
GAAGCGATGC CCGTTGCTAT ACCACCACCG GAACCGACGG GTGATGCTGG TCATCGTGGT 
TGA
 
Protein sequence
MSDQAPGLPP PRPIPIRERS SILFLERGQL DVIDGSFVVV DQRGIRTVIP VGGITCLMLE 
PGTRVSHAAV CLAARAGTLL IWVGEAGVRL YAAGQPGGAR SDRLLYQARL ALDDEARLRV 
VRRMYSIRFQ EEPPQRRSVD QLRGIEGVRV RELYKLMAQR HGVSWAGRRY DPQNWGGADL 
VNRCLSAATA ALYGISEAAI LAAGYAPAIG FLHSGKPQSF VYDIADLFKF ETVVPEAFKV 
VAAVQSGRGQ IDGMAIGEPV GAVRRRCRDA FRRTNVLARI IPAIEDVLAA GGLAVPEAPE 
EAMPVAIPPP EPTGDAGHRG