Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3295 |
Symbol | |
ID | 5159266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | + |
Start bp | 5797 |
End bp | 7950 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640538616 |
Product | UvrD/REP helicase |
Protein accession | YP_001220049 |
Protein GI | 148243810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.763792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGAACAA AACAGGAAAA TCGGATAGTC GGTTCCAACA CGGTGAAGGG ACCGAAAGTG ACCACCGCGA CCTATCTGGA CAAACTCAAC GTCGAGCAAC GAAGCGCGGT CGTCCACGGC ATCGATTCCG CCACGACAAC GCATATCGGC GCGCCGCTGC TGGTGATCGC CGGGGCAGGA TCCGGCAAGA CCAGCACGCT GGCTCATCGG GTAGCCCATC TGATCGTCAA CGGCGTCGAT CCTCGCCGCA TCCTGTTGAT GAGTTTCTCA CGCCGAGCCG CTGCCGAGAT GATCCGCCGC GCTGAACGCA TCTCGGTTCA GGCTATGGGC GGGAAGACAG GGGCAATGAC CGATGCTCTA ACCTGGGCGG GCACCTTCCA CGGCATCGGG GCTCGGCTGC TGCGGGACTA TGCCGAACAG ATCGGATTGG ATCCGGCATT CACGATCCAT GACCGGGAAG ATTCCGCCGA TCTGATGAAC CTTGTCCGGC ACGAACTGGG TTTCTCGACG ACTGAACGAC GGTTCCCGAC CAAAAGCACA TGCCTTTCGA TCTATTCCCG CTGCGTGAAC ACCGAATTGT CCCTCGATGA TATTCTGCCC ACGACTTTTC CATGGTGTTC GTCATGGGAG GCCGAACTGC AACATCTGTT CGGTGCTTAC GTCGAAGCGA AACAGCGGCA GAACGTGCTC GATTACGATG ACCTGTTGCT CTACTGGGCG CAGATGGTCA GCGAACCAGC TTTAGCCGAA GATATCGGCG GGCGTTTCGA TCACGTCCTG GTCGACGAGT ATCAGGACAC CAACAGGCTG CAATCTTCCA TTCTGCTCGC GCTGAAACCC GGCGGTCGCG GTCTGACTGT GGTAGGCGAC GACGCACAAT CGATCTACGC GTTCCGTGGT GCCACCGTGC GCAACATTCT CGATTTTCCT GGAGCGTTCA GCCCGGCGGC TGATATCATC ACGCTGGAAC AGAATTACCG GTCCACCACC GCGATCCTTG CCGCGGCAAA CGGGGTTATC GGCCTTGCCA AGGAGAGGTT CACGAAAAAC CTTTGGAGCA ATCGCACGAC TGAAACGCTA CCGCAGCTTG TCCATGTCCG CGACGACGCC GACCAGGCAC GGTTCATCGT CGAGCGCGTG CTCGAGAACC GCGAGGCCGG CATGACGCTC AAACAGCAGG CCGTTCTGTT CCGCACATCG CATCACAGCG GCGCCCTCGA GGTCGAACTG ACCCGGCGAA ACATCCCCTT CGTCAAATTC GGTGGACTGA AATTTCTGGA TTCCGCGCAT ATCAAGGATG TCATCGCCGT CCTGCGCTGG GCCGAGAACC CGCGCGACCG CGTCGCGGGC TTCCGGGTGA TGCAATTACT GCCTGGTGTG GGTCCGACCT CAGCCGCAAA AGTGATGGAT CACATGCAAG GCGCCGCCGA TCCGATCGGT GCCCTCGGCG ATGCGCCGAC ACCGCCGCGT GCCCGCAGCG ATTGGACGCA TTTTATCGAA ACCATCCGGA CTCTGCGGTC ACGCTCCGCC ATCTGGCCCG GCGAACTTGA GTTGATCCGC CGCTGGTACG AGCCGCATCT GGACCGCATG CACGACGATG CTAGCGTCCG GCTCGCCGAC CTGATCCAAC TCGAGCAGAT CGCCAGTGGC TATCCTTCAC GTGAACGCTT CCTGACCGAA CTGACGCTCG ATCCACCGGA CGCCACCAGC GATCAGGCCG GGGTACCGCT CCTCGACGAG GACTACCTCA ATCTCTCGAC TATCCATTCC GCCAAGGGCC AGGAATTCCA GTCGGTCTTC GTCCTGAACG TCGTGGACGG CTGCATGCCC TCCGATCTGG GCACCGGGCA ATCGCAAGAA ATCGAGGAGG AACGCCGCCT GCTCTACGTC GCGATGACGC GGGCCAAGGA TGATCTTCAC CTGATGATCC CGCAGCGGTT CTTCGTGCAT GGTCAGGCCG CCTATGGTGA TCGGCACGTC TACGCCGCGC GCACACGGTT CATACCGAAT GCCATCGTCC ATCTGTTCGA CATGACGAAC TGGCCGCCTG CAGTCGCTGG CCCCACCAAC GCCAAATCAA TCGGCCCGGT GCCACGCATT GATCTCAGCG CGCGGATACG CGGCATGTGG CGCTCGGGCG CGCAAAATGT GTAA
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Protein sequence | MRTKQENRIV GSNTVKGPKV TTATYLDKLN VEQRSAVVHG IDSATTTHIG APLLVIAGAG SGKTSTLAHR VAHLIVNGVD PRRILLMSFS RRAAAEMIRR AERISVQAMG GKTGAMTDAL TWAGTFHGIG ARLLRDYAEQ IGLDPAFTIH DREDSADLMN LVRHELGFST TERRFPTKST CLSIYSRCVN TELSLDDILP TTFPWCSSWE AELQHLFGAY VEAKQRQNVL DYDDLLLYWA QMVSEPALAE DIGGRFDHVL VDEYQDTNRL QSSILLALKP GGRGLTVVGD DAQSIYAFRG ATVRNILDFP GAFSPAADII TLEQNYRSTT AILAAANGVI GLAKERFTKN LWSNRTTETL PQLVHVRDDA DQARFIVERV LENREAGMTL KQQAVLFRTS HHSGALEVEL TRRNIPFVKF GGLKFLDSAH IKDVIAVLRW AENPRDRVAG FRVMQLLPGV GPTSAAKVMD HMQGAADPIG ALGDAPTPPR ARSDWTHFIE TIRTLRSRSA IWPGELELIR RWYEPHLDRM HDDASVRLAD LIQLEQIASG YPSRERFLTE LTLDPPDATS DQAGVPLLDE DYLNLSTIHS AKGQEFQSVF VLNVVDGCMP SDLGTGQSQE IEEERRLLYV AMTRAKDDLH LMIPQRFFVH GQAAYGDRHV YAARTRFIPN AIVHLFDMTN WPPAVAGPTN AKSIGPVPRI DLSARIRGMW RSGAQNV
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