Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2857 |
Symbol | |
ID | 5135429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 3011377 |
End bp | 3011862 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640534301 |
Product | hypothetical protein |
Protein accession | YP_001218707 |
Protein GI | 147673977 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00177194 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGGTGG TAATGTTAAG CTGGGATCTG TTTTTCGGAC TACTCAACGA CATGTTTTTT GCCGCGATTC CGGCGGTTGG GTTTGCTTTA GTCTTCAATG TGCCTGTGCC CGCATTGAAA TATTGTGCGT TAGGTGGTGC ACTTGGTCAT GGCTCGCGTT ATTTGATGAT GCACTTTGGC GTACCGATTG AGTGGGCGAG TTTTTTTGCC GCTACTCTAG TGGGTATGGT TGGTGTTTAT TGGTCTCGTC GTTTTCTGGC TCATCCTAAA GTGTTTACGG TTGCTGCGCT TATCCCGATG GTTCCTGGTG TTTTTGCATT TAAAGCCATG ATCGCGTTAG TCGAAATTAA CCATGTGGGT TTTTCGCCCG AGCTGATGGA AGCCTTATTA GAAAACTTCC TTAAAGCCAT GTTTATCATT GCGGGTTTGG CGGTTGGCCT TGCTGTACCT GGACTGTTAT TCTACCGCCG CAAACCGATT ATTTAA
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Protein sequence | MGVVMLSWDL FFGLLNDMFF AAIPAVGFAL VFNVPVPALK YCALGGALGH GSRYLMMHFG VPIEWASFFA ATLVGMVGVY WSRRFLAHPK VFTVAALIPM VPGVFAFKAM IALVEINHVG FSPELMEALL ENFLKAMFII AGLAVGLAVP GLLFYRRKPI I
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