| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2852 |
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| Symbol | ispB |
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| ID | 5135884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 3007298 |
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| End bp | 3008344 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534296 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_001218702 |
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| Protein GI | 147674613 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000355591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTA GTGTATTATG CAGCGATTCC AGAAGACTAA ATGCCTTACA CGCTCTTATT
TCAGCCGGAT TTACGATGGA TTTTAAAGCT ATCCAAGCGC TTACTGCCAA TGACATGGCA
AAAGTGAACG AAACGATTCA CGCTCAACTC AATTCTGACG TTTCCCTAAT CAACCAACTT
GGTTTCTATA TCATCAGTGG TGGTGGGAAG CGTTTACGCC CATTGCTGGC GGTTTTATCC
GCCAAAGCGC TCGGTTATCA AGGGTCACAT CACACGACTG CTGCTGCGTT TATTGAATTC
ATTCATACGG CAACCCTGTT GCACGATGAT GTGGTCGATG AATCAGACTT GCGCCGCGGT
AAAGCAACCG CCAATGCCGC GTTTGGTAAT GCCGCCAGCG TATTAGTCGG TGATTTTATC
TACACTCGCT CGTTTCAGAT GATGACAGAA TTAGGATCAA TGAAGATCCT GAAACTGATG
AGTGATGCAG TAAACGTGAT CGCTGAAGGT GAAGTACAGC AATTAATGAA CTGTAACGAT
CCTGATACCA CCGAAGCCAG CTACATGCAG GTTATTTACT CCAAAACTGC ACGTCTGTTT
GAAGCGGCAA CCCAGATTGG CGCTATCCTG TGTGATGCTT CTCCTGAAGT CGAACTGGCG
ATGCAAAACT ACGGTAAATA CCTAGGCACA GCCTTCCAAC TGATTGATGA TGTGATGGAT
TACACTTCAG ATGGTGATGA GATGGGTAAA AACGTCGGTG ACGATCTGGC AGAAGGCAAA
CCTACCCTAC CACTGCTTTA TGCGATGCAG CACGGGAATC CTGAGCAAGC CGCGATGATC
CGTGAAGCCA TCGAGAAAGC CAATGGCATG TCGCGTCTTA ATGAGATTCT CGCAGCGATG
GAGCAAACCG GTTCTTTACA ATACACCATT GAAAAGGCGC TGCATGAAGC GGATAAAGCC
ATCGCTGAAC TTGCGATTTT GCCAGAAAGC GAATACAAAC AAGCCTTGAT CACGCTCGCC
CATATGGCGG TCAATCGCAG TAAATAG
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| Protein sequence | MIFSVLCSDS RRLNALHALI SAGFTMDFKA IQALTANDMA KVNETIHAQL NSDVSLINQL
GFYIISGGGK RLRPLLAVLS AKALGYQGSH HTTAAAFIEF IHTATLLHDD VVDESDLRRG
KATANAAFGN AASVLVGDFI YTRSFQMMTE LGSMKILKLM SDAVNVIAEG EVQQLMNCND
PDTTEASYMQ VIYSKTARLF EAATQIGAIL CDASPEVELA MQNYGKYLGT AFQLIDDVMD
YTSDGDEMGK NVGDDLAEGK PTLPLLYAMQ HGNPEQAAMI REAIEKANGM SRLNEILAAM
EQTGSLQYTI EKALHEADKA IAELAILPES EYKQALITLA HMAVNRSK
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