Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2841 |
Symbol | tldD |
ID | 5136089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2993484 |
End bp | 2994929 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640534285 |
Product | tldD protein |
Protein accession | YP_001218691 |
Protein GI | 147675411 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA ACCAAATTGA AACGGCACTG CTGGCACCCG CTGGGCTCAC TGAACAGGAT ATTGCCGATA CGCTGTCCAG TATTGCGACT CGCCAGATTG ATTATGCCGA TATTTATTTC CAATCCAGCT GGCATGAATC TCTAGTGCTG GAAGACAGCA TCATTAAAGA CGGCTCATTC AATATTGATT GTGGGGTCGG TGTGCGCGCC GTCAGTGGTG AAAAAACCGG TTTTGCTTAT TCCGACCAAA TTCAGTTAGA AGGTTTAAAG CAGAGTGCCA TCGCGGCGCG TGGGATTGCT CAACAAGGCC AAAACCTCAC CGTACAAGCG TTTAAGCGCG CGCAACATCC TGCGTTTTAT GGCGCGCATA ACCCACTGGA AAGTTGGGAA AAACAGCAAA AAACCGAACT GCTGAAACAA CTGGATGCGT ACATTCGTAC TAAAGAGCCT CTCATTACCG AAGTGTCAGT CAGTCTAAGT GGTGTGCATG AGCAGATCCT CGTGGCGGCT ACCGATGGCA CGTACGCAGG GGATATTCGT CCTCTGGTTC GTCTTTCGAT CAGTGTGTTG GCGCAAAAAG GCGATCGCCG TGAGCGCGGT AGCGCCGGTG GTGGTGGCCG TTTTGGTTAC GACTATTTCT TACAAGAAGA AGCGGGACAA AAAATCGCGT TTTCTTTCGC CGATGAAGCG ATTCGTCAAG CGCTCGTTAA CCTTGAAGCG GTAGCCGCTC CTGCCGGAAC CATGCCTGTG GTACTCGGTT CTGGTTGGCC GGGTGTGTTG CTGCATGAGG CGGTGGGTCA TGGCCTGGAA GGCGATTTTA ACCGTAAAGG CTCGTCGGTA TTTGCAGGCA AAGTCGGCAA AAAAGTCACT TCCGATCTGT GTACGATTGT CGATGACGGT ACACTCAAAG ATCTGCGCGG CTCTCTCAAC GTTGATGATG AAGGGGTAAG TGGTCAATAC AACGTGCTGA TCGAAAAAGG TATTTTGAAA GGCTACATCC AAGACAAGCT CAATGCTCGT TTAATGGGCG TGGCACCAAC GGGTAACGGA CGCCGTGAAT CTTACGCTCA TCTGCCGATG CCGCGTATGA CCAATACTTA CATGCTACCG GGCGAGCACA CACCAGAAGA GATCATCGCT TCGGTGAAAA AAGGCATTTA CGCGCCGAAC TTTGGTGGCG GTCAGGTCGA TATCACCTCC GGTAAGTTTG TGTTCTCGGC CTCTGAAGCT TACTTGATTG AAAATGGCAA AATCACCCGT CCAATCAAAG GCGCAACTCT GATTGGTTCT GGTATTGAAG CCATGCAGCA GGTATCTATG GTCGGTAACG ATCTGGCGCT GGATCGTGGT GTTGGCGTGT GTGGTAAAGC CGGACAAAGC GTGCCTGTGG GCGTTGGCCA GCCAACTCTG AAGTTGGATG CCCTGACCGT GGGTGGGACA GAGTAA
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Protein sequence | MTMNQIETAL LAPAGLTEQD IADTLSSIAT RQIDYADIYF QSSWHESLVL EDSIIKDGSF NIDCGVGVRA VSGEKTGFAY SDQIQLEGLK QSAIAARGIA QQGQNLTVQA FKRAQHPAFY GAHNPLESWE KQQKTELLKQ LDAYIRTKEP LITEVSVSLS GVHEQILVAA TDGTYAGDIR PLVRLSISVL AQKGDRRERG SAGGGGRFGY DYFLQEEAGQ KIAFSFADEA IRQALVNLEA VAAPAGTMPV VLGSGWPGVL LHEAVGHGLE GDFNRKGSSV FAGKVGKKVT SDLCTIVDDG TLKDLRGSLN VDDEGVSGQY NVLIEKGILK GYIQDKLNAR LMGVAPTGNG RRESYAHLPM PRMTNTYMLP GEHTPEEIIA SVKKGIYAPN FGGGQVDITS GKFVFSASEA YLIENGKITR PIKGATLIGS GIEAMQQVSM VGNDLALDRG VGVCGKAGQS VPVGVGQPTL KLDALTVGGT E
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