Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2792 |
Symbol | |
ID | 5135928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2937859 |
End bp | 2938524 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640534238 |
Product | hypothetical protein |
Protein accession | YP_001218650 |
Protein GI | 147674968 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.17249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGAA CTGCATCGGC GGCGCTGGTC ACCGCACTGA TGGTCATGCC TTTATCGGCC TCTGCCGCTG AATCATTTTA TACTGCGTCA GTGGGCGCTG AGATGTGGTT AGCGAGCACG AAAATTGATA ACACTCGTCG TGATGATGCG AACGCGCCTA ACCTTTATTT TACGTTTGAG CACGGTTTTC CTTACCTGCC GAATGTGGGC TTGCGTTATA CCAATTTAGA AGCGGATTTC GCTTCGTTCG ATAAGATCGA TTACACCTTT TATTATCCAT TGCTCAATCG CGAATTGATG AAGTTCGATG CGGGTATCAC TCTAACCCAA TATGCGAACA GTGATTACCG TGCGGCAGAT GCCCGTCGCT ACGATTTTGA TCAAACCACG TTTAACTGGT ATGCCAGCGC CGAAATTACC ATTCCTCATA CGCCTTTTGA TGTGATTGGT CAGTTTGATT TTGGTAACAA TAGTGACCTG AAATCATCCG ATGTGATGGC TGGCTTGCAA TACCATCTGC CGATCCGAGC GGGAGACCTC GCATTCAAAG CGGGCTATCG AGTGGTAGAT CTTGAGTTCA CTGAACTGGC TAAGCAGTCC ACCGATGTAA AGCAATCTTT TGTTTTTGCC GATGGTTGGT TTGTGGGGGC TCAATTTAGC TTCTGA
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Protein sequence | MNRTASAALV TALMVMPLSA SAAESFYTAS VGAEMWLAST KIDNTRRDDA NAPNLYFTFE HGFPYLPNVG LRYTNLEADF ASFDKIDYTF YYPLLNRELM KFDAGITLTQ YANSDYRAAD ARRYDFDQTT FNWYASAEIT IPHTPFDVIG QFDFGNNSDL KSSDVMAGLQ YHLPIRAGDL AFKAGYRVVD LEFTELAKQS TDVKQSFVFA DGWFVGAQFS F
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