| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2783 |
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| Symbol | alr |
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| ID | 5136019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2930058 |
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| End bp | 2931185 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640534229 |
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| Product | alanine racemase |
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| Protein accession | YP_001218641 |
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| Protein GI | 147674692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000262761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACC TGCATTTGAC GATGAGTAAT TCGATGAACT ATATGAAGGC GGCCACCGCC
TACATCAATT TAGAGGCGTT GCAGCACAAC TTGCAGCGCG TTAAGCAGCA AGCGCCAGAG
AGTAAAATCA TGGCGGTGGT GAAAGCCAAT GGTTATGGAC ACGGGCTGCG CCATATCGCA
CGTCACGCCC TTGGGGCGGA TGCCTTTGGC GTGGCGCGCA TTGAAGAGGC TTTACAGCTG
CGCGCCAGTG GCGTAGTGAA ACCCATTTTG TTGCTTGAGG GATTTTATTC TCCCGGTGAT
TTGCCAGTAT TGGTTACCAA CAACATCCAG ACCGTCGTGC ATTGTGAAGA GCAGTTACAA
GCGCTAGAGC AAGCTCAGCT AGAGACTCCG GTCATGGTAT GGCTGAAAGT CGACAGTGGG
ATGCATCGGT TAGGGGTTCG CCCTGAACAA TATCAAGATT TCGTGGCTCG TTTGCACCAG
TGCGATAATG TGGCTAAACC ACTGCGTTAC ATGAGCCATT TCGGCTGTGC CGATGAGTTA
GATAAATCGA CGACGGTAGA GCAAACGGAA CTGTTTTTAT CCCTGACACA AGGCTGTCAG
GGTGAGCGTT CGCTGGCCGC TTCTGCCGGA TTATTAGCTT GGCCGCAAAG CCAGCTTGAA
TGGGTAAGGC CGGGAATTAT TATGTACGGC GTTTCTCCCT TTGTGGAAAA GAGCGCGGTT
CAGTTAGGTT ACCAGCCAGT GATGACCTTA AAGTCGCACT TGATCGCTGT CCGTGAAGTG
AAAGCGGGGG AGAGTGTCGG TTATGGCGGT ACTTGGACCA GCCAGCGAGA TACCAAAATT
GGTGTGATTG CGATTGGTTA TGGTGATGGC TATCCACGCA CTGCGCCGAA TGGGACACCA
GTGGTTGTCA ATGGGCGTCG GGTGCCGATT GCTGGGCGCG TATCTATGGA TATGTTGACG
GTAGATTTAG GGCCGGATGC TTGCGATCGC GTCGGTGATG AAGCCATGCT GTGGGGTAAT
GAGCTGCCCG TAGAAGAAGT GGCCGCGCAT ATTGGTACGA TAGGGTATGA GTTAGTGACG
AAACTCACCT CGCGAGTGGA AATGTCTTAT TATGGAGCAG GCGTTTAG
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| Protein sequence | MLDLHLTMSN SMNYMKAATA YINLEALQHN LQRVKQQAPE SKIMAVVKAN GYGHGLRHIA
RHALGADAFG VARIEEALQL RASGVVKPIL LLEGFYSPGD LPVLVTNNIQ TVVHCEEQLQ
ALEQAQLETP VMVWLKVDSG MHRLGVRPEQ YQDFVARLHQ CDNVAKPLRY MSHFGCADEL
DKSTTVEQTE LFLSLTQGCQ GERSLAASAG LLAWPQSQLE WVRPGIIMYG VSPFVEKSAV
QLGYQPVMTL KSHLIAVREV KAGESVGYGG TWTSQRDTKI GVIAIGYGDG YPRTAPNGTP
VVVNGRRVPI AGRVSMDMLT VDLGPDACDR VGDEAMLWGN ELPVEEVAAH IGTIGYELVT
KLTSRVEMSY YGAGV
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