| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2777 |
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| Symbol | rpsF |
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| ID | 5135975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2926279 |
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| End bp | 2926647 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534223 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001218635 |
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| Protein GI | 147675449 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000778979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT ATTCATGGTG CACCCAGATC AAAGCGAGCA AGTTGCTGGC
ATGATCGAAC GTTACACTGG CTCAATCACT GAAGCTGGCG GTAAAATCCA CCGTCTAGAA
GATTGGGGTC GCCGTCAACT GGCTTACCCA ATCAACAAAC TGCACAAAGC TCACTACGTT
CTGATGAACG TTGAAGCTGA CCAAGCAGTG GTTGATGAGC TAGAAACTGC TTTCCGTTTC
AACGATGCAG TTCTGCGTAA CATGATCATG CGTACTAAAG CTGCTATTAC TGAACCTTCA
ATCATGCTGA AAGCTCGTGA AGAGCGTGTA AAGCGTGACG AGATGAAGTT CGACGCAGAC
GTTGAGTAA
|
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| Protein sequence | MRHYEIVFMV HPDQSEQVAG MIERYTGSIT EAGGKIHRLE DWGRRQLAYP INKLHKAHYV
LMNVEADQAV VDELETAFRF NDAVLRNMIM RTKAAITEPS IMLKAREERV KRDEMKFDAD
VE
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