| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2726 |
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| Symbol | rplK |
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| ID | 5137806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2879894 |
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| End bp | 2880322 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640534172 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001218592 |
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| Protein GI | 147675238 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000093206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AAGTTGAAGC TTATGTAAAG CTGCAAGTTG CAGCTGGCAT GGCAAACCCA
AGTCCACCAG TTGGTCCTGC TCTAGGTCAA CGCGGTGTTA ACATCATGGA ATTCTGTAAA
GCGTTCAACG CACGTACAGA ATCTCTAGAG AAAGGTCTAC CAATCCCAGT AGTTATTACT
GTGTACAGCG ACCGTTCTTT CACGTTCGAA ACTAAGACTC CACCAGCATC TGTTCTTCTG
AAGAAAGCAG CTGGCATCAA GTCTGGTTCT GCACGTCCTA ACACTGCTAA AGTGGGCACA
ATCACTGACG CTCAAATCCA AGAAATCGCT GCGACTAAAG CAGCTGACAT GACTGGTGCT
GATATCGAAG CGATGAAGCG TTCTATCGCA GGTACTGCTC GCTCAATGGG CCTAGTGGTT
GAGGGTTAA
|
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| Protein sequence | MAKKVEAYVK LQVAAGMANP SPPVGPALGQ RGVNIMEFCK AFNARTESLE KGLPIPVVIT
VYSDRSFTFE TKTPPASVLL KKAAGIKSGS ARPNTAKVGT ITDAQIQEIA ATKAADMTGA
DIEAMKRSIA GTARSMGLVV EG
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