Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2724 |
Symbol | secE |
ID | 5135965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2878804 |
End bp | 2879199 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640534170 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_001218590 |
Protein GI | 147673835 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000108515 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGGTT GGTTTATGAA AGCAAACAAC GCTGAAGCTC CTGATAGCTC AAATGCAGCA GACACTCTAA AGTGGGTAGC CACTTTTGTT CTGCTGGTTG CCGCTGTTGT GGGTAATTAC CTGTATGGTG AACTGTCTGT GGTGGCTCGC GCCGCAGGTG TAATTGTGTT GATTGCTGCA GCACTTGGTG TTGCTGCGAC AACAACAAAA GGCAAAGAAG CGATCGTTTT TGCTCGCGAA TCTCGCATGG AAGTTCGCAA AGTAGTTTGG CCAACACGCC AAGAAACTAT GCAAACCACG CTGATCGTTT TAGCAGTAAG TATTGTAATG GCTCTGGCGC TTTGGGGTAT TGACGGCATT ATGGTTCGTC TAGTGGCCTT TGCGACCGGA GTATAG
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Protein sequence | MTGWFMKANN AEAPDSSNAA DTLKWVATFV LLVAAVVGNY LYGELSVVAR AAGVIVLIAA ALGVAATTTK GKEAIVFARE SRMEVRKVVW PTRQETMQTT LIVLAVSIVM ALALWGIDGI MVRLVAFATG V
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