Gene VC0395_A2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2724 
SymbolsecE 
ID5135965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2878804 
End bp2879199 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content48% 
IMG OID640534170 
Productpreprotein translocase subunit SecE 
Protein accessionYP_001218590 
Protein GI147673835 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000108515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGGTT GGTTTATGAA AGCAAACAAC GCTGAAGCTC CTGATAGCTC AAATGCAGCA 
GACACTCTAA AGTGGGTAGC CACTTTTGTT CTGCTGGTTG CCGCTGTTGT GGGTAATTAC
CTGTATGGTG AACTGTCTGT GGTGGCTCGC GCCGCAGGTG TAATTGTGTT GATTGCTGCA
GCACTTGGTG TTGCTGCGAC AACAACAAAA GGCAAAGAAG CGATCGTTTT TGCTCGCGAA
TCTCGCATGG AAGTTCGCAA AGTAGTTTGG CCAACACGCC AAGAAACTAT GCAAACCACG
CTGATCGTTT TAGCAGTAAG TATTGTAATG GCTCTGGCGC TTTGGGGTAT TGACGGCATT
ATGGTTCGTC TAGTGGCCTT TGCGACCGGA GTATAG
 
Protein sequence
MTGWFMKANN AEAPDSSNAA DTLKWVATFV LLVAAVVGNY LYGELSVVAR AAGVIVLIAA 
ALGVAATTTK GKEAIVFARE SRMEVRKVVW PTRQETMQTT LIVLAVSIVM ALALWGIDGI
MVRLVAFATG V