| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2697 |
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| Symbol | rhlB |
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| ID | 5137252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2858424 |
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| End bp | 2859740 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640534145 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001218575 |
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| Protein GI | 147674746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.578293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CGCATATCAC AGAGCATAAG TTCGCCGACT TTGGTTTACA GCCACAAGTT
ATTGATGGAC TGGAAAAAAA GGGGTTTGTT TACTGCACCC CTATCCAAGC ATTGGCGTTG
CCGGTACTGC TCTCCGGCCA AGACATCGCA GGCCAGGCCC AAACAGGGAC TGGTAAAACG
CTCGCGTTTC TTACTGCTAC CTTCAACCAT TTATTGACCA CACCAGCCGC TGAAGGCCGA
GCAGAAACTC AGCCACGCGC CATTATTATG GCCCCGACTC GCGAACTGGC AATTCAGATC
TTTAATGATG CCGAGCCTTT GTTGGCCTCC ACTGGTCTGA AAGCAGCTTT GGCTTATGGT
GGCGAAAGCT ATGATAAGCA ACTCGCAAAA TTGCAAAGTG GCGTCGATAT TCTGATCGGG
ACCACCGGCC GCATTATCGA TTTCTACAAA CAGCGTGTAT TCAACCTCAA TCACATTCAA
GCAGTGGTAC TGGATGAAGC AGATCGCATG TTTGATCTCG GCTTTATTAA AGACATTCGT
TTCTTGTTCC GCCGTATGCC TGAGCCCAAA GATCGTCTCA ACATGCTGTT CTCTGCCACC
CTCTCTTACC GCGTGCAAGA GCTGGCTTTT GAACACATGA ACAATCCTGA ACATGTGGTG
GTAGAACCTG AGCAAAAAAC CGGTCATCGC ATTCAGGAAG AGCTGTTCTA CCCATCGAAC
GAACACAAGA TGGCGCTGCT ACAGACTCTT ATCGAAGAAG AGTGGCCAGA TCGCGCAATC
ATTTTTGCTA ACACTAAGCA CCGCTGTGAA CAGATTTGGG CACATTTGGC GGCCGATAAC
CACCGTGTTG GCCTACTGAC TGGTGATGTA CCGCAGAAAA AACGTGAGCG TATTTTAGAG
CAGTTCACCC AAGGTGATGT GGACATTCTG GTTGCGACCG ACGTTGCGGC GCGCGGCTTG
CACATTCCTC AAGTGACCCA CGTGTTTAAC TACGATTTGC CTGACGATTG TGAAGACTAT
GTACACCGTA TTGGCCGTAC GGGTCGTGCG GGCGCAAGTG GCCACTCGAT AAGCTTTGCG
TGTGAAGAGT ACGCGATTAA TTTGCCGGCG ATCGAAAGCT ACATTGAGCA TGCGATTCCA
ACCTCAGACT ACGATCCTTC AGCTCTGCTG ACGGACTTAC CTGCGCCTCT GAGCCTACGT
TCGTCGCCAC AACAGCGCCG CACCAATACC GCAGGTTCTC GCAATAGCAA TAATGGTGGC
AATCGCAAAC CTCAGCAACG CCGCCCACGC GCACCACGCC CGAAAAAGGA AGCCTGA
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| Protein sequence | MKKTHITEHK FADFGLQPQV IDGLEKKGFV YCTPIQALAL PVLLSGQDIA GQAQTGTGKT
LAFLTATFNH LLTTPAAEGR AETQPRAIIM APTRELAIQI FNDAEPLLAS TGLKAALAYG
GESYDKQLAK LQSGVDILIG TTGRIIDFYK QRVFNLNHIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPEPK DRLNMLFSAT LSYRVQELAF EHMNNPEHVV VEPEQKTGHR IQEELFYPSN
EHKMALLQTL IEEEWPDRAI IFANTKHRCE QIWAHLAADN HRVGLLTGDV PQKKRERILE
QFTQGDVDIL VATDVAARGL HIPQVTHVFN YDLPDDCEDY VHRIGRTGRA GASGHSISFA
CEEYAINLPA IESYIEHAIP TSDYDPSALL TDLPAPLSLR SSPQQRRTNT AGSRNSNNGG
NRKPQQRRPR APRPKKEA
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