| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2687 |
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| Symbol | prmA |
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| ID | 5136459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2843397 |
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| End bp | 2844284 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640534135 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001218565 |
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| Protein GI | 147675659 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000011349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTGGA TTCAAATTAA ACTCAATGCG ACCAACGACA ATGCAGAAGC AATTGGCGAT
ATGCTGATGG AAGAAACTGG TGCTGTGTCA GTCACTTTCC TCGATGCCAA AGATACCCCT
GTATTTGAAC CTCTACCGGG CGAAACCCGC CTATGGGGTG ATACCGATGT CGTCGCACTG
TACGAAGCGG ATATGGATAC CTCGCTGATC CTTCAGCAAA TCAAAGCCAG CAACATGCTG
GCTGAAGGTT TTGCTCACAA AGTGGAGCAA GTGGAAGATA AGGACTGGGA ACGCGAATGG
ATGGATAACT TCCACCCAAT GCAATTTGGC CGTCGCCTCT GGATTTGCCC AAGCTGGCGT
GAAGTGCCAG ACCCACAAGC GGTGAACGTG ATGCTCGACC CGGGCTTGGC TTTTGGTACC
GGCACGCACC CAACCACCGC ACTGTGCCTA GAGTGGCTGG ATAACCTCGA CCTGACTGGC
AAAACCGTGA TCGATTTTGG TTGTGGCTCG GGCATTCTGG CGATTGCCGC CATCAAGCTT
GGTGCCGCAA AAGTGATCGG GATTGATATC GATCCACAAG CTCTACTCGC GTCCAAAGAC
AACGCTGCGC GTAACGGCGT GGAAGATCAA ATCGAAGTTT ATCTGCCAAA AGATCAACCC
GAAGGCTTGG TGGCTGACGT GGTGGTCGCG AACATTTTGG CTGGCCCACT GCGTGAGCTT
TCGCCCACCA TCAAAGGACT CCTGAAGCCC GGTGGCCAAC TGGCCATGTC TGGCATTCTG
GATACGCAAG CCGAAAGCGT GGCGGAATTT TACCGTGACG ATCTGGAACT TGACCCAATC
GCAGAGAAGA GCGAATGGTG CCGCATTTCT GGCCGCAAGC TAGGCTAG
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| Protein sequence | MPWIQIKLNA TNDNAEAIGD MLMEETGAVS VTFLDAKDTP VFEPLPGETR LWGDTDVVAL
YEADMDTSLI LQQIKASNML AEGFAHKVEQ VEDKDWEREW MDNFHPMQFG RRLWICPSWR
EVPDPQAVNV MLDPGLAFGT GTHPTTALCL EWLDNLDLTG KTVIDFGCGS GILAIAAIKL
GAAKVIGIDI DPQALLASKD NAARNGVEDQ IEVYLPKDQP EGLVADVVVA NILAGPLREL
SPTIKGLLKP GGQLAMSGIL DTQAESVAEF YRDDLELDPI AEKSEWCRIS GRKLG
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