| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2676 |
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| Symbol | cas |
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| ID | 5136197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2834914 |
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| End bp | 2835789 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640534124 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_001218554 |
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| Protein GI | 147674033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGG GAGAGCGGCT GTTTGTTAAA GTAACGCGTG AATCCTTGCC CCAAGTGAAA
GATAAATATC CCTTTATTTA TCTTGAACGA GGACGGCTGG AAATTGACGA CAGTAGTGTC
AAGTGGATTG ATGCCGATGC CAACATAGTC CCGATTCCAG TAGCAACGAT TAACACATTG
CTACTAGGTC CGGGAACCAG TGTAACTCAT GACGCAATCA AAACCGCAAC TGCGGCAAAC
TGTTCCATCA GTTGGGTGGG GGAGGATAGT TTACTGTTTT ATGCAGCTGG TTTTCTTCCC
ACTGCAGACA CAAGAAATCT AAAGAAGCAG ATGTTGTTAG CGGCCAGCGA AGAGAGTGCA
TTGAAAGTGG CACGCATGAT GTTCGCTAAG CGTTTTCCTG ATGCAGACCT TGAAGACAAA
ACCCTAAAAA GCATGATGGG GATGGAAGGA AACCGTGTAA AAGCGCTCTA TCAACAAAAG
GCCGAGCAGT ATGGTGTCGG CTGGAGAGGG CGACAGTTTA CGCCAGGTAA GTTTTCTTTA
AGTGATCTTA CCAATCAAAT CATGACGGCT AGCAATGCTG CCTTGTATGG CATTTTGTGT
TCAGCTATCC ACTCAATGGG CTACTCACCA CATATTGGAT TTATCCATTC GGGCAGCCCA
TTACCTTTTG TGTATGACAT GGCAGATCTT TACAAAGAAC ACCTTTGTAT TGATTTAGCT
TTCTCACTTA CACGAGATAT GGCAGGTCAC TATGACAAAC ACAAGGTCTC TGATGCGTTT
CGAAAACGGG TTATCAGCAT GGATCTGTTA CAACAAGTCT CCTCGGATAT CAATGAGTTG
ATGGGAGGGG GAAATGCTCG TCGTACTAGC AAATGA
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| Protein sequence | MAKGERLFVK VTRESLPQVK DKYPFIYLER GRLEIDDSSV KWIDADANIV PIPVATINTL
LLGPGTSVTH DAIKTATAAN CSISWVGEDS LLFYAAGFLP TADTRNLKKQ MLLAASEESA
LKVARMMFAK RFPDADLEDK TLKSMMGMEG NRVKALYQQK AEQYGVGWRG RQFTPGKFSL
SDLTNQIMTA SNAALYGILC SAIHSMGYSP HIGFIHSGSP LPFVYDMADL YKEHLCIDLA
FSLTRDMAGH YDKHKVSDAF RKRVISMDLL QQVSSDINEL MGGGNARRTS K
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