| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2670 |
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| Symbol | cas |
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| ID | 5137344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2827873 |
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| End bp | 2830386 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640534118 |
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| Product | CRISPR-associated helicase Cas3 domain-containing protein |
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| Protein accession | YP_001218548 |
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| Protein GI | 147673323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCCTG GACGTAATGT CCCTGAACAT TGCCAAATTG TTGGTGAAAT TGCCAAAGTG
CTGATTCAAC GATTTCCTCC CGCAATACAG AGAATCTTAT TTCCTGTTGG GAGTGAGTTG
GCTGCAGCTT GCCATGATAT TGGCAAAGTC AGCCCAACGT TTGTTGCCAA GATTTTTAAA
GCGTGTGGAA TCGATACTCA AACGCTACCC GCTTTAGCTA ATGTGAATCC GTCTCTGGAA
TCGCAATGGG GTGGCCATGC AGGTGTAAGC CAAGCGACCG CAGAAGAAAT CATGGCGCCC
AAGTACGTTG CGCATATCCT TGGACAACAT CATGGCTTTA GCCCAAGTGG TGTTGATGAT
AAGCGAGGAA ATGCGGCGGT ATTTGGCGGA GAGTCGTGGT TTGAGGAACG CCGTAAACTG
GTGAACCATC TAAAGGAAGT ATTGAACACG GAGTGGCCTA AATTTGAGCG AGCAGAACAA
GCTAGAGTTG TTGCTGGTTT AACCTCTGTT GCGGATTGGA TTGGCTCCGG CAGCTTTTTT
GAAGATCCCA CTCAAGCATG GAAACCTAAT GTTATTAAAG CGCTAAATTG TGCTGGTTTC
ATAACGCCCT CAATTATCAA AGACATGTCT TTTACTGATA TTTTCGATCC AGCTAAACGT
AACATGAAAC CCAGAGAGGC CCAGATTCAG TTTGTCAATC AGGTTACAGG TCCTGGTGTG
TATGTGCTTG AAGCGCAGAT GGGAATGGGA AAAACTGAGG CTGCACTCTA CGCCGCCTAT
CGATTGCTTG CTGAAGCCAA AGCCACTGGG ATTTATTTTG CGCTACCGAC ACAACTGACC
TCTAATAAAA TTTATGACCG TTTTAATTCA TTTCTAGAAC AAATTATCGC GGCTGAAACA
CCGAACCGTG CAATGTTACT TCACTCTGGT GCATGGTTGC TGAAACAAGC AGATATGGGT
GAAGAGGGCA GTCCAGGTGG CGCTTGGTTT AATCACAACA AGAGAGGTCT TTTAGCGCCT
TTTGCTGTTG GGACTATTGA TCAGGCGCTA ATGGCCGTGA TGAATGTAAA ACATGGTTTT
GTGAGAGCTT TTGGGCTCGC TGGCAAGGTG GTGATCCTTG ATGAAGTCCA TAGCTATGAT
CTCTACACAG GCACCATCTT AAATGAGCTG GTGGCGTTTC TTCGGCAAAT TGGCTGTACC
GTCATTATAT TAAGTGCCAC GTTGAGCCCT GCTCGCCGTC ACTCCCTACT ACAACAACGC
ACTTCCAGTT CTGAGTATCC ATTAATTACC GCATTGCATA ATGACAGGGA TTCTCCCAGC
GAAGTTGCTA TTCCCTGCGT CGATGGCGCA AAGGTGGAAC TGACACATTG CTCCAACGAC
TTGCAAGCTA TCGAAGAGGC GATAAACCGT GCAGCTATGG GGCAACAAGT ATTGTGGATT
GAGAATACCG TGGCAGATGC CCAACAGCGC TATTTAGATA TGGCGAGCAG AGGCGTGGGT
TTAGGCTGTG AAGTGGGATT ATTGCATTCA AGATTTACTC CGCAAGATAG AGAGAAGAAT
GAACAGCACT GGGTGAGTCT CTTTGGTAAA GCGGGTTGGT CGCAGCGTCG GCAATGTGGT
CGTATCTTAA TTGGAACTCA AGTTCTCGAA CAATCGATTG ACATAGATGC TGATTTTTTG
ATTACCCAAT TTGCTCCGAC CGATATGTTG TTGCAGCGAA TTGGTCGGTT ATGGCGTCAT
CTTGATGCTC CTAGAGCGAC ATCAGCACGT TGTGAGTGTT GGTTGTTGGC TCCCAACCTA
GAACAAGCAC TGAGTTCGCC CTCTTCTGCC TTTGGTCTTA GTGCTATGGT CTATTCGCCC
TATGTGTTGT GCCGCAGTTT GGAAGTATGG CTTGGTCTAT CTCACCTTGC GCTGCCTTCC
AGCATCCGCC CACTGATTGA TCAAACCTAC TGCGAGCGTG ATGAGTCAGC ACAGTGGGCA
TTTTTACTCC ACCAGCTCAA AGCAGGCTCA CGGTATAAAA CAGGTGAAAA AGCGCTGCAA
GCATTAGCCA AAATCACCTT AGCAAAGGCG GGAAAAACCT TACCCGAACA TAAAGCCGAT
ACCCGCTATA GCGATCAAGA TACTTATGAA GTATTGCTTC TACGAGCTAT TCGCACTAGT
GAGGGTCATA CCTACATACG ATTGTTGGAT AACCGTGAAT TGATCTTGCC GCATGCTCGC
TACCAATTAA GCAAAGCACA ATGGCGAGAA CTGGCTGTTG AGCTTCACCA GTCTCTGGTC
AAAGTGAGCC CCAAAAATTG TCCAGACAAA ATATCCAAAC ACCAACTTGA GCAACTGCAT
TTACATCATG TTTTTTATCT CGGTAATCCG GAGGAAGATG AGGCGTTACT CAGAATTGCT
TTAGTTAGCC CCGTAGGGGA GTTGCTAACG TTGGATGGGC GCAGAGCCAG CGACAAATAT
CAGTTGGAAT ACCGACACGA TCTGGGCTAC CGAGTCATTG TACAAAAGGA ATAA
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| Protein sequence | MIPGRNVPEH CQIVGEIAKV LIQRFPPAIQ RILFPVGSEL AAACHDIGKV SPTFVAKIFK
ACGIDTQTLP ALANVNPSLE SQWGGHAGVS QATAEEIMAP KYVAHILGQH HGFSPSGVDD
KRGNAAVFGG ESWFEERRKL VNHLKEVLNT EWPKFERAEQ ARVVAGLTSV ADWIGSGSFF
EDPTQAWKPN VIKALNCAGF ITPSIIKDMS FTDIFDPAKR NMKPREAQIQ FVNQVTGPGV
YVLEAQMGMG KTEAALYAAY RLLAEAKATG IYFALPTQLT SNKIYDRFNS FLEQIIAAET
PNRAMLLHSG AWLLKQADMG EEGSPGGAWF NHNKRGLLAP FAVGTIDQAL MAVMNVKHGF
VRAFGLAGKV VILDEVHSYD LYTGTILNEL VAFLRQIGCT VIILSATLSP ARRHSLLQQR
TSSSEYPLIT ALHNDRDSPS EVAIPCVDGA KVELTHCSND LQAIEEAINR AAMGQQVLWI
ENTVADAQQR YLDMASRGVG LGCEVGLLHS RFTPQDREKN EQHWVSLFGK AGWSQRRQCG
RILIGTQVLE QSIDIDADFL ITQFAPTDML LQRIGRLWRH LDAPRATSAR CECWLLAPNL
EQALSSPSSA FGLSAMVYSP YVLCRSLEVW LGLSHLALPS SIRPLIDQTY CERDESAQWA
FLLHQLKAGS RYKTGEKALQ ALAKITLAKA GKTLPEHKAD TRYSDQDTYE VLLLRAIRTS
EGHTYIRLLD NRELILPHAR YQLSKAQWRE LAVELHQSLV KVSPKNCPDK ISKHQLEQLH
LHHVFYLGNP EEDEALLRIA LVSPVGELLT LDGRRASDKY QLEYRHDLGY RVIVQKE
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