| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2658 |
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| Symbol | cadA |
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| ID | 5136620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2812171 |
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| End bp | 2814372 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534106 |
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| Product | lysine decarboxylase, inducible |
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| Protein accession | YP_001218536 |
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| Protein GI | 147675733 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTCG TCTTACTCAC TGTGCAGTGC ACAGAGAGCG CCTTTTTTCG CCTTGGAGAT
GTCCAAATGA ATATTTTCGC TATCTTGAAC CACATGGGTG TGTTCTTTAA AGAAGAGCCT
GTTCGCCAAC TGCATGCAGC ATTAGAAAAA GCCGGTTACG ACGTGGTTTA TCCGGTGGAT
GACAAAGATC TGATCAAGAT GATTGAGATG AACCCACGCA TTTGCGGCGT GCTGTTCGAC
TGGGATAAAT ACTCGCTAGA GCTGTGTGAG CGCATCAGTA AAGTCAATGA AAAACTGCCA
GTGCACGCCT TTGCTAACGA GCAATCGACA TTAGATATTT CGCTAACCGA CCTGCGCCTC
AACGTGCATT TCTTCGAATA CGCTCTGGGC ATGGCCGACG ATATCGCCAT CAAGATCAAC
CAAGCGACCC AAGAGTACAA AGACGCGATC ATGCCTCCGT TTACTAAGGC GCTGTTCAAA
TACGTGGAAG AGGGTAAATA CACCTTCTGT ACTCCGGGCC ATATGGGCGG TACTGCGTTC
CAGAAAAGCC CTGTTGGCAG CATTTTCTAC GATTTCTACG GTCCAAATAC TTTCAAAGCG
GACGTATCGA TTTCGATGCC AGAACTGGGT TCACTGCTCG ATCACTCCGG CCCACACAAA
GAAGCGGAAG AGTACATCGC ACGCACGTTC AATGCCGATG CCTCTTACAT CGTGACCAAC
GGTACATCGA CCTCGAACAA GATCGTCGGT ATGTTCTCCG CGCCTGCGGG TAGCACAGTG
CTGGTGGATC GTAACTGCCA TAAATCATTG ACTCACTTAA TGATGATGAC GGACGTCACC
CCCATTTACT TCCGTCCAAC CCGTAACGCT TACGGCATTC TCGGTGGTAT TCCACAGAGC
GAATTCAGCC GTGAAGTGAT TGCAGAGAAA GTGGCAAACA CTCCGGGGGC GAGCGCGCCA
AGCTACGCGG TGATCACCAA CTCGACTTAC GATGGCCTGC TGTACAACAC CCAGTTCATC
AAAGAGTCGT TGGATTGCAA ACACATCCAC TTCGACAGTG CATGGGTGCC TTACACTAAC
TTCAACCGTA TTTATGAAGG CAAGTGCGGC ATGAGTGGTG AAGCGATGCC GGGTAAAGTG
TTCTACGAAA CGCAGTCCAC GCACAAACTG CTGGCGGCGT TCTCGCAAGC CTCGATGATT
CATGTCAAAG GTGAGTTTGA CCGCGAGTCG TTCAACGAAG CCTTTATGAT GCACACCTCA
ACCTCACCAC AGTACGGCAT TGTGGCATCG ACGGAAACTG CCGCTGCAAT GATGCGTGGC
AACACTGGTC GTAAGTTGAT GCAAGATTCG ATTGATCGTG CGATTCGCTT CCGTAAAGAG
ATCAAACGTC TGAAAGGCGA GAGCGAAGGC TGGTTCTTCG ATGTGTGGCA ACCCGAGAAT
ATTGAGACCA CCGAGTGCTG GAAACTCGAT CCAAACCAAG ATTGGCACGG CTTCAAGAAT
CTTGATGACA ACCACATGTA CCTTGATCCA ATTAAAATCA CTCTGCTCAC TCCGGGAATG
AGCAAAGATG GCGAATTGGA GCAGAGCGGT ATTCCGGCAT CACTGGTCTC TAAATACCTT
GATGAACACG GCATCGTGGT TGAGAAAACC GGCCCTTACA ACCTACTGTT CCTGTTCTCT
ATCGGTATTG ATAAGTCAAA AGCAATGCAG TTGCTGCGTG GCCTGACTGA GTTCAAACGC
GGTTACGATC TGAACCTGAC CATTCGTACC ATGCTGCCTT CACTGTACCG TGAAGACCCA
GCTTTCTACG AAGGCATGCG TATTCAAGAG TTGGCGCAAG GCATTCACGA TTTAACCCGT
AAATACCAAC TGCCAGAGCT GATGTACAAA GCGTTCGATG TGCTGCCAGA GATGAAAGTG
ACGCCACACG TGGCATGGCA ACAAGAGCTG CGCGGTCAAA CCGAAGAGAT CCTGCTTAAC
GAGATGGTGG GTCGCGTGAG CGCCAATATG ATCCTGCCTT ATCCTCCAGG CGTGCCATTG
GTACTGCCAG GTGAAATGGT GACAGACAGC TCTCGCCCTG TGTTGGATTT CTTGGAAATG
CTGTGTGAAA TCGGCGCGCA TTACCCAGGA TTTGAGACAG ACATTCATGG TTTGTATCGC
CAAAAAGATG GCTCTTACAC CGTAAAAGTG CTGAAGGACT AA
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| Protein sequence | MALVLLTVQC TESAFFRLGD VQMNIFAILN HMGVFFKEEP VRQLHAALEK AGYDVVYPVD
DKDLIKMIEM NPRICGVLFD WDKYSLELCE RISKVNEKLP VHAFANEQST LDISLTDLRL
NVHFFEYALG MADDIAIKIN QATQEYKDAI MPPFTKALFK YVEEGKYTFC TPGHMGGTAF
QKSPVGSIFY DFYGPNTFKA DVSISMPELG SLLDHSGPHK EAEEYIARTF NADASYIVTN
GTSTSNKIVG MFSAPAGSTV LVDRNCHKSL THLMMMTDVT PIYFRPTRNA YGILGGIPQS
EFSREVIAEK VANTPGASAP SYAVITNSTY DGLLYNTQFI KESLDCKHIH FDSAWVPYTN
FNRIYEGKCG MSGEAMPGKV FYETQSTHKL LAAFSQASMI HVKGEFDRES FNEAFMMHTS
TSPQYGIVAS TETAAAMMRG NTGRKLMQDS IDRAIRFRKE IKRLKGESEG WFFDVWQPEN
IETTECWKLD PNQDWHGFKN LDDNHMYLDP IKITLLTPGM SKDGELEQSG IPASLVSKYL
DEHGIVVEKT GPYNLLFLFS IGIDKSKAMQ LLRGLTEFKR GYDLNLTIRT MLPSLYREDP
AFYEGMRIQE LAQGIHDLTR KYQLPELMYK AFDVLPEMKV TPHVAWQQEL RGQTEEILLN
EMVGRVSANM ILPYPPGVPL VLPGEMVTDS SRPVLDFLEM LCEIGAHYPG FETDIHGLYR
QKDGSYTVKV LKD
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