| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2653 |
|---|
| Symbol | purH |
|---|
| ID | 5137582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2806027 |
|---|
| End bp | 2807619 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640534101 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001218531 |
|---|
| Protein GI | 147673909 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG CTCGTCCTAT TCACCGTGCG CTTCTCAGCG TATCAGATAA AACCGGCATT
GTTGAGTTCG CAAAAGCGCT TGCAGAGCGC GGCGTTGAAC TTCTCTCCAC CGGTGGCACC
GCTCGTCTAT TGGCTGAGCA AGGCCTGACG GTAACGGAAG TCTCCGATTA CACCGGTTTC
CCAGAAATGA TGGACGGACG CGTCAAAACC CTGCATCCGA AAGTGCATGG CGGTATTTTA
GGCCGTCGCG GCCAAGATGA CGCGGTGATG AATACCCACG GCATTCAGCC AATCGATATG
GTGGTGGTGA ACCTCTATCC TTTCGCCCAA ACGGTAGCTA ACCCAAATTG CACGCTGGCT
GATGCGGTGG AAAACATCGA TATCGGCGGG CCGACTATGG TGCGTTCTGC TGCAAAAAAC
CATAAAGATG TGGCCATTGT GGTGAATGCG CACGATTACG ACCGTGTGAT CCGCGAAATG
GATGCCAACC ACAACTCCCT GACGTTAGCG ACGCGTTTTG ATCTGGCGAT TGCCGCTTTT
GAACATACCG CGGCGTACGA TGGCATGATT GCGAACTACT TCGGCACACT CGTACCTTCT
TATGGTGATA ACAAAGAAGG GGATGAAGAG AGCAAATTCC CTCGCACGTT CAATGCGCAG
TTCATCAAAA AGCAAGATAT GCGTTATGGC GAAAACAGCC ACCAAGCGGC CGCGTTTTAT
GTAGAAGCCA ATCCACAAGA AGCCTCAGTC GCCACCGCGC GCCAAATTCA AGGTAAAGCC
CTTTCTTACA ACAACATTGC CGATACCGAT GCCGCACTAG AGTGCGTCAA AGAGTTCAGC
GAGCCAGCCT GTGTGATTGT GAAACACGCG AACCCATGTG GTGTAGCGCT GGGCGATGAT
CTTCTGCAAG CTTACAATCG CGCTTACCAA ACCGACCCAA CCTCGGCATT TGGCGGCATC
ATTGCCTTTA ACCGCGAGCT GGATGGCGAA ACCGCAAGAG CGATCATCGA GCGTCAGTTT
GTGGAAGTGA TCATTGCGCC GAAAGTCTCG CAAGCCGCGA TCGACATCGT CGCAGCAAAA
CAAAACGTAC GTTTGCTGGA GTGTGGTGAA TGGCAAGGCC AAACCACAGG ATTTGATTTG
AAGCGCGTGA ATGGTGGCTT ATTGGTGCAA GATCGTGACC AAGGCATGGT GGCACAAGAT
GACCTACAAG TGGTTTCGAC TCGTCAACCT AGCGACGCTG AGCTGAAAGA TGCTCTGTTC
TGCTGGAAAG TAGCGAAATA CGTGAAATCC AACGCGATTG TGTACGCCAA AGGCGACATG
GCCATCGGCA TCGGCGCGGG TCAAATGAGC CGTGTTTACT CCGCGAAAAT CGCCGGCATC
AAAGCCGCCG ATGAAGGCTT GGAAGTCGCG GGCAGCGTGA TGGCATCGGA TGCCTTCTTC
CCCTTCCGTG ATGGGATTGA TGCTGCGGCC GAAGCGGGCA TTACCTGTGT TATCCAACCG
GGCGGCTCAA TGCGCGACCA AGAGGTGATT GATGCGGCCA ACGAACACGG TATGGCGATG
ATCTTCACCG GTATGCGTCA CTTCCGTCAT TAA
|
|---|
| Protein sequence | MNNARPIHRA LLSVSDKTGI VEFAKALAER GVELLSTGGT ARLLAEQGLT VTEVSDYTGF
PEMMDGRVKT LHPKVHGGIL GRRGQDDAVM NTHGIQPIDM VVVNLYPFAQ TVANPNCTLA
DAVENIDIGG PTMVRSAAKN HKDVAIVVNA HDYDRVIREM DANHNSLTLA TRFDLAIAAF
EHTAAYDGMI ANYFGTLVPS YGDNKEGDEE SKFPRTFNAQ FIKKQDMRYG ENSHQAAAFY
VEANPQEASV ATARQIQGKA LSYNNIADTD AALECVKEFS EPACVIVKHA NPCGVALGDD
LLQAYNRAYQ TDPTSAFGGI IAFNRELDGE TARAIIERQF VEVIIAPKVS QAAIDIVAAK
QNVRLLECGE WQGQTTGFDL KRVNGGLLVQ DRDQGMVAQD DLQVVSTRQP SDAELKDALF
CWKVAKYVKS NAIVYAKGDM AIGIGAGQMS RVYSAKIAGI KAADEGLEVA GSVMASDAFF
PFRDGIDAAA EAGITCVIQP GGSMRDQEVI DAANEHGMAM IFTGMRHFRH
|
|---|
| |