Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2640 |
Symbol | |
ID | 5136964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2793505 |
End bp | 2794059 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640534088 |
Product | putative capsule biosynthesis protein |
Protein accession | YP_001218518 |
Protein GI | 147673652 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATTC GATTTCTTGA TTTTATTTTT GCTCTAGTTG GGCTGTTGTT ACTCTGGCCT GTGTTATTGA TTGTGTGCAT TTTGGGCTAT TTTGATACTG GCTCCCCCAT TTTCTGCCAA CAGCGAGTCG GTAAGAATCA GCGTCCATTT ACCCTCATTA AATTTCGAAC CATGCCAAAG AATACTGCGT CGGTGGCAAC CCATTTGGTT GGTGCTTCTT CTGTCACTAG GCTTGGTCAG TTTCTGCGCA AAACCAAGCT TGATGAGCTT CCACAATTGA TCAATGTGCT GAAGGGGGAA ATGAGTTTAG TTGGGCCTCG ACCTTGCTTG TTTAATCAAC AAGATCTGAT TGTTGAACGA GAAGCCCGTG GAGTGTTTAC TGTTCTCCCT GGCATTACGG GACTGGCTCA AGTAAACGAA GTGGATATGT CGACACCGGT AAAGCTTGCA GAGCTTGATC AACAGATGAT TCAAACGCTG AATTTAAAAA ACTACTTTAC GTATATCATT CAGACCGTTT TAGGCAAGGG AGCGGGTGAT CGTGTTAAGC CATAA
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Protein sequence | MVIRFLDFIF ALVGLLLLWP VLLIVCILGY FDTGSPIFCQ QRVGKNQRPF TLIKFRTMPK NTASVATHLV GASSVTRLGQ FLRKTKLDEL PQLINVLKGE MSLVGPRPCL FNQQDLIVER EARGVFTVLP GITGLAQVNE VDMSTPVKLA ELDQQMIQTL NLKNYFTYII QTVLGKGAGD RVKP
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