Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2621 |
Symbol | rfbA |
ID | 5136956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2772932 |
End bp | 2774329 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640534070 |
Product | mannose-1-phosphate guanylyltransferase |
Protein accession | YP_001218500 |
Protein GI | 147675701 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG0836] Mannose-1-phosphate guanylyltransferase |
TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATAC CTGTAATTAT GGCTGGTGGC TCCGGCTCTA GGCTTTGGCC CCTTTCACGT TCGGCTTTTC CAAAACAATT CTTATCCTTA GATAGCAGTA GTCAGCATAC TATGCTACAA GCCACTATTG AGCGTTTACA GGGGCTACCT ATTGCTGAAC CCATTGTTAT TTCGAATGAA GATCATCGTT TTATCGTTGC GGAACAAATT CGTCGTTATG GCAAAAAGTC TCGCATTATC TTAGAACCAG CAGGAAGGAA CACTGCACCT GCGATCGCCT TAGCAGCATT TACGGCAATC GAACAGGAGG ATGACCCCGT ATTGCTAGTA TTGGCTGCCG ATCATTTTGT AAAAAATAAA AGTGCATTTC AGGCTGCTAT TTCACAAGCA GCTCAACAGG CAGAGGCTGG TAAACTTGCT ACTTTTGGTA TCGTTCCCAC CACTCCTGAA ACAGGTTATG GTTATATTCA CCGGGGTGAA GAGGTTACAC AAGGCACTTA TGAAATTAAC TCATTTGTTG AAAAGCCACA GTTAAATATT GCTGAGCAGT ATTTAGCCAG TGGTGAATAT TACTGGAACA GTGGTTGTTT TATGTTTAAA GCTTCCGTGT TCTTAAATGA GTTGAAGCAA CATTCTCCAG AGATCTATCG CCAATGTGAA CTTGCAATGC AAGGCCTTTC TCACGATTAC GATTTTATTC GTGTCGGTGT AGAAGAGTTC CTTAAATGTC CTGATGATTC AATCGACTAT GCCGTTATGG AGCACACTAA ACTAGGTGTG GTAGTATCTA TGGATGCCGG ATGGAGTGAT GTAGGTTCTT GGTCTGCATT ATGGGAAGTA TCTGATAAAG ATGCAGACGG TAACGTATGC CAAGGTGATG CCATTTTAAG TGGCACCTCT AATTGTTATA TCTACGCCCC AAATAAACTG GTTGCTGCGG TTGGCTTGAA AGATATTGTT GTGGTGGAAA CTAAAGATGC CGTGTTAGTT GCAGACAAAA ACCAAGTACA AGAAGTCAAG AAGATAGTTG AACATTTGAA GGCAGAAAAC CGAGCTGAAT ATCGAGAACA CAGGGAACGT TATCGCCCTT GGGGTAAATC TGATGCGATT GATAAAGGCG AGCGTTACAA AGTAAACCGT ATTACGGTTG AGCCTGGTAA AAAGCAATCA TTGCAGATGC ATTACCACCG AGCAGAGCAC TGGGTAGTGG TCTCTGGTAC TGCCAAGGTA ACTTGTGAAG GTAATGTTAA AGTAATCACG GAAAACCAGT CCTTGTATAT CCCTATTGGT ACAAATCATA TGATAGAAAA CCCAGGTAAG ATCCCGCTAG AGCTTATTGA AATTCAATCC GGTTCATACC TAAACGAAGA TGATGTAGTA CGTTTCGAGG ATAAATAA
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Protein sequence | MFIPVIMAGG SGSRLWPLSR SAFPKQFLSL DSSSQHTMLQ ATIERLQGLP IAEPIVISNE DHRFIVAEQI RRYGKKSRII LEPAGRNTAP AIALAAFTAI EQEDDPVLLV LAADHFVKNK SAFQAAISQA AQQAEAGKLA TFGIVPTTPE TGYGYIHRGE EVTQGTYEIN SFVEKPQLNI AEQYLASGEY YWNSGCFMFK ASVFLNELKQ HSPEIYRQCE LAMQGLSHDY DFIRVGVEEF LKCPDDSIDY AVMEHTKLGV VVSMDAGWSD VGSWSALWEV SDKDADGNVC QGDAILSGTS NCYIYAPNKL VAAVGLKDIV VVETKDAVLV ADKNQVQEVK KIVEHLKAEN RAEYREHRER YRPWGKSDAI DKGERYKVNR ITVEPGKKQS LQMHYHRAEH WVVVSGTAKV TCEGNVKVIT ENQSLYIPIG TNHMIENPGK IPLELIEIQS GSYLNEDDVV RFEDK
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