Gene VC0395_A2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2621 
SymbolrfbA 
ID5136956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2772932 
End bp2774329 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content42% 
IMG OID640534070 
Productmannose-1-phosphate guanylyltransferase 
Protein accessionYP_001218500 
Protein GI147675701 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATAC CTGTAATTAT GGCTGGTGGC TCCGGCTCTA GGCTTTGGCC CCTTTCACGT 
TCGGCTTTTC CAAAACAATT CTTATCCTTA GATAGCAGTA GTCAGCATAC TATGCTACAA
GCCACTATTG AGCGTTTACA GGGGCTACCT ATTGCTGAAC CCATTGTTAT TTCGAATGAA
GATCATCGTT TTATCGTTGC GGAACAAATT CGTCGTTATG GCAAAAAGTC TCGCATTATC
TTAGAACCAG CAGGAAGGAA CACTGCACCT GCGATCGCCT TAGCAGCATT TACGGCAATC
GAACAGGAGG ATGACCCCGT ATTGCTAGTA TTGGCTGCCG ATCATTTTGT AAAAAATAAA
AGTGCATTTC AGGCTGCTAT TTCACAAGCA GCTCAACAGG CAGAGGCTGG TAAACTTGCT
ACTTTTGGTA TCGTTCCCAC CACTCCTGAA ACAGGTTATG GTTATATTCA CCGGGGTGAA
GAGGTTACAC AAGGCACTTA TGAAATTAAC TCATTTGTTG AAAAGCCACA GTTAAATATT
GCTGAGCAGT ATTTAGCCAG TGGTGAATAT TACTGGAACA GTGGTTGTTT TATGTTTAAA
GCTTCCGTGT TCTTAAATGA GTTGAAGCAA CATTCTCCAG AGATCTATCG CCAATGTGAA
CTTGCAATGC AAGGCCTTTC TCACGATTAC GATTTTATTC GTGTCGGTGT AGAAGAGTTC
CTTAAATGTC CTGATGATTC AATCGACTAT GCCGTTATGG AGCACACTAA ACTAGGTGTG
GTAGTATCTA TGGATGCCGG ATGGAGTGAT GTAGGTTCTT GGTCTGCATT ATGGGAAGTA
TCTGATAAAG ATGCAGACGG TAACGTATGC CAAGGTGATG CCATTTTAAG TGGCACCTCT
AATTGTTATA TCTACGCCCC AAATAAACTG GTTGCTGCGG TTGGCTTGAA AGATATTGTT
GTGGTGGAAA CTAAAGATGC CGTGTTAGTT GCAGACAAAA ACCAAGTACA AGAAGTCAAG
AAGATAGTTG AACATTTGAA GGCAGAAAAC CGAGCTGAAT ATCGAGAACA CAGGGAACGT
TATCGCCCTT GGGGTAAATC TGATGCGATT GATAAAGGCG AGCGTTACAA AGTAAACCGT
ATTACGGTTG AGCCTGGTAA AAAGCAATCA TTGCAGATGC ATTACCACCG AGCAGAGCAC
TGGGTAGTGG TCTCTGGTAC TGCCAAGGTA ACTTGTGAAG GTAATGTTAA AGTAATCACG
GAAAACCAGT CCTTGTATAT CCCTATTGGT ACAAATCATA TGATAGAAAA CCCAGGTAAG
ATCCCGCTAG AGCTTATTGA AATTCAATCC GGTTCATACC TAAACGAAGA TGATGTAGTA
CGTTTCGAGG ATAAATAA
 
Protein sequence
MFIPVIMAGG SGSRLWPLSR SAFPKQFLSL DSSSQHTMLQ ATIERLQGLP IAEPIVISNE 
DHRFIVAEQI RRYGKKSRII LEPAGRNTAP AIALAAFTAI EQEDDPVLLV LAADHFVKNK
SAFQAAISQA AQQAEAGKLA TFGIVPTTPE TGYGYIHRGE EVTQGTYEIN SFVEKPQLNI
AEQYLASGEY YWNSGCFMFK ASVFLNELKQ HSPEIYRQCE LAMQGLSHDY DFIRVGVEEF
LKCPDDSIDY AVMEHTKLGV VVSMDAGWSD VGSWSALWEV SDKDADGNVC QGDAILSGTS
NCYIYAPNKL VAAVGLKDIV VVETKDAVLV ADKNQVQEVK KIVEHLKAEN RAEYREHRER
YRPWGKSDAI DKGERYKVNR ITVEPGKKQS LQMHYHRAEH WVVVSGTAKV TCEGNVKVIT
ENQSLYIPIG TNHMIENPGK IPLELIEIQS GSYLNEDDVV RFEDK