Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2620 |
Symbol | rfaD |
ID | 5135515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2771546 |
End bp | 2772490 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640534069 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_001218499 |
Protein GI | 147674538 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCG TAACTGGCGG CGCTGGCATG ATTGGCAGCA ACATTATCAA AGCGCTTAAT GAGCGCGGTA TCACAGACAT TCTGGTCGTC GATCATTTGA AAAATGGTCG TAAGTTCAAA AATCTGGTTG ACCTACAGAT CGCTGACTAC ATGGATCGAG ATGACTTCCT AGCTCAGATC ATGGCCGGTG ATGATTTTGG GTTCATTGAC GCCATTTTTC ATGAGGGAGC TTGCTCTGCG ACCACAGAGT GGGATGGCAA ATATGTCATG CTCAACAACT ATGAATACTC TAAAGAGCTG CTGCACTACT GTTTAGATCG TGAAATACCC TTCCTGTATG CCTCTTCAGC AGCCACTTAT GGTGAAACCG ATACCTTTAT TGAAGAACCG CAATACGAAG GTGCACTCAA CGTTTACGGC TATTCGAAGC AGCAATTTGA TAACTATGTA CGCCGCCTAT GGCTAGATGC AAAACAACAC GACGAAACCC TATCGCAAAT AACGGGATTT CGTTACTTCA ACGTATACGG CCCTCGTGAG CAGCATAAAG GCTCGATGGC TTCGGTTGCC TTTCATTTGA ACAATCAAAT GAACGCGGGT GAAAATCCAA AATTGTTTGC TGGCAGCGAG AACTTCAAAC GTGATTTCGT TTATGTCGGC GATGTCGCTG CGGTCAATTT GTGGTTTTTA GATCATGGCG TATCCGGCAT ATTTAACTGT GGTACTGGTA AAGCGGAATC GTTCAACGAA GTGGCGAAAG CGGTGATCGC ATTCCATGGT CGCGGCGAAG TCGAAACCAT TCCATTCCCA GACCATCTTA AAGGTGCTTA CCAAGAGTTC ACTGAGGCTG ACCTTACCAA ACTTCGCGCT GCTGGCTGTG ATGTACAGTT CAAGAGCGTG GCTGAAGGTG TCGCTGAATA TATGGCGCTG ATTAATCGTA AGTAA
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Protein sequence | MIIVTGGAGM IGSNIIKALN ERGITDILVV DHLKNGRKFK NLVDLQIADY MDRDDFLAQI MAGDDFGFID AIFHEGACSA TTEWDGKYVM LNNYEYSKEL LHYCLDREIP FLYASSAATY GETDTFIEEP QYEGALNVYG YSKQQFDNYV RRLWLDAKQH DETLSQITGF RYFNVYGPRE QHKGSMASVA FHLNNQMNAG ENPKLFAGSE NFKRDFVYVG DVAAVNLWFL DHGVSGIFNC GTGKAESFNE VAKAVIAFHG RGEVETIPFP DHLKGAYQEF TEADLTKLRA AGCDVQFKSV AEGVAEYMAL INRK
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