Gene VC0395_A2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2620 
SymbolrfaD 
ID5135515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2771546 
End bp2772490 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content46% 
IMG OID640534069 
ProductADP-L-glycero-D-mannoheptose-6-epimerase 
Protein accessionYP_001218499 
Protein GI147674538 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCG TAACTGGCGG CGCTGGCATG ATTGGCAGCA ACATTATCAA AGCGCTTAAT 
GAGCGCGGTA TCACAGACAT TCTGGTCGTC GATCATTTGA AAAATGGTCG TAAGTTCAAA
AATCTGGTTG ACCTACAGAT CGCTGACTAC ATGGATCGAG ATGACTTCCT AGCTCAGATC
ATGGCCGGTG ATGATTTTGG GTTCATTGAC GCCATTTTTC ATGAGGGAGC TTGCTCTGCG
ACCACAGAGT GGGATGGCAA ATATGTCATG CTCAACAACT ATGAATACTC TAAAGAGCTG
CTGCACTACT GTTTAGATCG TGAAATACCC TTCCTGTATG CCTCTTCAGC AGCCACTTAT
GGTGAAACCG ATACCTTTAT TGAAGAACCG CAATACGAAG GTGCACTCAA CGTTTACGGC
TATTCGAAGC AGCAATTTGA TAACTATGTA CGCCGCCTAT GGCTAGATGC AAAACAACAC
GACGAAACCC TATCGCAAAT AACGGGATTT CGTTACTTCA ACGTATACGG CCCTCGTGAG
CAGCATAAAG GCTCGATGGC TTCGGTTGCC TTTCATTTGA ACAATCAAAT GAACGCGGGT
GAAAATCCAA AATTGTTTGC TGGCAGCGAG AACTTCAAAC GTGATTTCGT TTATGTCGGC
GATGTCGCTG CGGTCAATTT GTGGTTTTTA GATCATGGCG TATCCGGCAT ATTTAACTGT
GGTACTGGTA AAGCGGAATC GTTCAACGAA GTGGCGAAAG CGGTGATCGC ATTCCATGGT
CGCGGCGAAG TCGAAACCAT TCCATTCCCA GACCATCTTA AAGGTGCTTA CCAAGAGTTC
ACTGAGGCTG ACCTTACCAA ACTTCGCGCT GCTGGCTGTG ATGTACAGTT CAAGAGCGTG
GCTGAAGGTG TCGCTGAATA TATGGCGCTG ATTAATCGTA AGTAA
 
Protein sequence
MIIVTGGAGM IGSNIIKALN ERGITDILVV DHLKNGRKFK NLVDLQIADY MDRDDFLAQI 
MAGDDFGFID AIFHEGACSA TTEWDGKYVM LNNYEYSKEL LHYCLDREIP FLYASSAATY
GETDTFIEEP QYEGALNVYG YSKQQFDNYV RRLWLDAKQH DETLSQITGF RYFNVYGPRE
QHKGSMASVA FHLNNQMNAG ENPKLFAGSE NFKRDFVYVG DVAAVNLWFL DHGVSGIFNC
GTGKAESFNE VAKAVIAFHG RGEVETIPFP DHLKGAYQEF TEADLTKLRA AGCDVQFKSV
AEGVAEYMAL INRK