Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2606 |
Symbol | |
ID | 5136692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2757200 |
End bp | 2758273 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640534055 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001218485 |
Protein GI | 147673782 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.21938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTATGG CATTGTTTCA ATCAGCCCCA CACTCCCTCT GTATCCTGCG TTTATCGGCG ATTGGTGATG TCTGTAATAC GATAGCTGCC GTACAAGCGA TTCAACGCCA ATGGCCGCAA ACACGCATCA CTTGGGTGAC GGGTAAACTG GAAGCAGAAC TTATCCAATC TCTGCCCGAT ATTCAGGTCA TCGTGTTTGA TAAAAAACTC GGATGGCGTG CTTATACTCA GCTTTGGCAG CAATTAAAGT CCGAGCGTTT TGATGCGCTG CTGCACATGC AGTACGCTTT TCGCGCCAGC ATTGCGACTT TGGGGATCAA AGCGCGCTAT AAACTGGGTT TTGATGCAGC GCGCAGCCAA GATTTTCAAA CTTGGTTTAC CAATGTCAAA GTTCCCTCAC CGGACAAAAT GCACGTCTTA GATGGTTTAT TGGCATTCGT TGAGCACTTA GGTATTCGCG ATATTGAGCC TAAGTGGTCA CTCACCTGCC AACCTGACGA TCTGACATGG GCTGAGGCGC AGTTTCAGCC CGAGCAGCCT CGCTTAGTTG TGGTGCCCGG AGCAAGCAAA GCTTATAAGA ATTGGACGGC AGAGGGCTAT GCAGCAGTTA TTGAACATGC CCAACAACAA GGCTGGCAAG TGATCTTGGC CGGAAGCCCA GCACAAGTTG AGCGCGATCT GGCCGCGCAA GTGGAGCAAG CACTCGCTCA CCCCGTCTTA AACTTGGTGG GAAAAAGCAC GCTGCAACAG ATGCTCGCAC TGATCGCAAA GGCAGATTTG GTGATCGCTC CCGATACAGG CCCTGCGCAT ATGGCTAATG CCATGAATAC ACCAATCATT GGTCTCTACG CTCACCATAA TCCTGAGCGC ACAGGTCCAT ACCATTATCG CCACTATGTC GTTTCCGTTT ACCAAGAAGC TTTACTTGCG GAAACCGGTA AAACGCCGCA GCAGGTTGAT TGGCGCACTC GGGTTAAAGA CCCCAATGCG ATGCAGCGCA TCACTGCGCA ACAAGTGATT GCGATGTTTG AGCGTGCCGC TGCTGACATC ATGGCCACAC AGGTGAACGA TTGA
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Protein sequence | MAMALFQSAP HSLCILRLSA IGDVCNTIAA VQAIQRQWPQ TRITWVTGKL EAELIQSLPD IQVIVFDKKL GWRAYTQLWQ QLKSERFDAL LHMQYAFRAS IATLGIKARY KLGFDAARSQ DFQTWFTNVK VPSPDKMHVL DGLLAFVEHL GIRDIEPKWS LTCQPDDLTW AEAQFQPEQP RLVVVPGASK AYKNWTAEGY AAVIEHAQQQ GWQVILAGSP AQVERDLAAQ VEQALAHPVL NLVGKSTLQQ MLALIAKADL VIAPDTGPAH MANAMNTPII GLYAHHNPER TGPYHYRHYV VSVYQEALLA ETGKTPQQVD WRTRVKDPNA MQRITAQQVI AMFERAAADI MATQVND
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