Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2582 |
Symbol | |
ID | 5135963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2735898 |
End bp | 2736857 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640534031 |
Product | iron(III) ABC transporter, periplasmic iron-compound-binding protein |
Protein accession | YP_001218461 |
Protein GI | 147674066 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00742029 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTTGA TGAGTCTATG GAATGTTCGT CTGCGGAACA TTTGCCGACC AAAGGCCGTT TTTGGCTGGC TTGCCGCGCT TTGTCTATTC GCACTGCCCG TGCAAGCACA AATTGTGCTG ACGGATAGCC AAGGGACGCA CACTTTTGCT GAGGTTCCAC AGCGAGTGGT GGTGCTGAAC TGGGATCTGC TTGAACAAGT GCTTGAACTG GGCATTCAGC CCGTTGGCGC GCCGGAATTG AGTTCTTACG TGCAGTGGGT TGTGCAACCC GAGGTGCCAA GTTCGGTGCA AGATATTGGC ACTCGTACTG AGCCGAATTT AGAGAAAATC GCCGCACTTA AACCGGATGT CATTTTAGCC GCAGGGCCGC AACAAGATTT GCTGGCCACC TTAGGGCGCA TCGCGCCAGT GGTGTATCTA CCCAATTTTT CCGAGCAAGA TAACGCTGCC CAAGTGGCGA TTTCCCACTT TAAAACCTTA GCTACCTTGT TTGGTAAAGA GGCGGTGGCG CAGCAAAAAC TGGAGGCGAT GTATGCCCGT TTTTCTGAGC TGAAAGCTTC GCTACAGCAC GCCTTTGGTG ACACTTTACC TGCGGTGGTG ACACTGCGTT TTGCCAACCC AACCTCGGTG TTTCTGTATA CCGAAAACTC CACGCCGCAA TATGTGCTAG AACAGCTCGG TTTATCGTCA GCGCTGCCGC AGCCGCCGAA AGAGTGGGGC ATAGTGCAAA AACGCTTGAG TGAGTTGCAA CACGTTGAGC AAGGCTATGT GCTCTATTTC TTGCCGTTTG CGGAAGAGAA AAAAGTGCAA AAATCGGTGT TGTGGCGCGC GATGCCGTTT GTGCAGGCGG GGCGTGTCAA TTCCGTGCGT CCTGTGTGGA GCTACGGCGG GGCGATGTCG CTGCGTTATA GCGCAGAAGC GATCACCGAA AGCTTGCTGG CGGTGGCTCC GCAATCATGA
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Protein sequence | MCLMSLWNVR LRNICRPKAV FGWLAALCLF ALPVQAQIVL TDSQGTHTFA EVPQRVVVLN WDLLEQVLEL GIQPVGAPEL SSYVQWVVQP EVPSSVQDIG TRTEPNLEKI AALKPDVILA AGPQQDLLAT LGRIAPVVYL PNFSEQDNAA QVAISHFKTL ATLFGKEAVA QQKLEAMYAR FSELKASLQH AFGDTLPAVV TLRFANPTSV FLYTENSTPQ YVLEQLGLSS ALPQPPKEWG IVQKRLSELQ HVEQGYVLYF LPFAEEKKVQ KSVLWRAMPF VQAGRVNSVR PVWSYGGAMS LRYSAEAITE SLLAVAPQS
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