| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2534 |
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| Symbol | fadB |
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| ID | 5136027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2685981 |
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| End bp | 2688152 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533985 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001218427 |
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| Protein GI | 147673120 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.386757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTACC AAGCCAAAAC CCTACAGGTA AAGCAACTCG CTAATGGAAT TGCCGAGCTC
TCTTTCTGTG CTCCTGCTTC CGTTAACAAA CTGGATTTAC ACACACTGGA ATCCCTCGAT
AAAGCGTTAG ATGCGCTCGC TGCCGATTCC AGTGTCAAAG GCCTCCTACT CAGCTCAGAT
AAAGAGGCTT TTATCGTCGG CGCTGATATC ACCGAATTTC TCGGGCTATT TGCCAAACCG
GAAGCAGAAT TGGATGAGTG GTTGCAGTTT GCCAATCGCA TTTTTAACAA GTTGGAAGAT
TTACCTTTCC CCACCTTGTC AGCGTTAAAA GGCCACACAC TTGGCGGCGG CTGTGAATGT
GTACTCGCCA CCGATTTTCG GATTGGTGAT GCCACCACCA GCATTGGCTT GCCTGAAACC
AAACTGGGCA TCATGCCGGG ATTTGGCGGC ACCGTGCGTC TGCCACGTTT GATTGGTGCT
GATAGCGCGA TGGAAATCAT CACCCAAGGT AAAGCGTGCC GCGCGGAAGA AGCCTTAAAA
GTGGGATTAC TGGATGCGAT TGTCGATAGC GACAAACTGA TCGATTCCGC AATCACCACT
TTGACTCAAG CGATTGAAGA AAAACTGGAT TGGCAAAAAC GCCGTCAGCA GAAAACCTCA
GCGCTGACTT TAAGCAAGCT GGAAGCCATG ATGAGCTTTA CCATGGCAAA AGGCATGGTG
GCGCAAGTGG CAGGCAAACA CTATCCAGCA CCGATGACAT CTGTCGTGAC CATTGAAGAA
GCGGCGCGTT TACCACGCGA TGCTGCGCTG GATATCGAGC GCAAACACTT CATCAAGCTC
GCAAAATCTA CCGAGGCGCA AGCACTGGTT GGTATTTTCC TCAATGATCA ATACATCAAA
GGCTTAGCCA AACAATCCGC GAAAGCGGCA AGCCAAGACA CCCAACACGC CGCCGTGCTC
GGCGCGGGCA TTATGGGTGG GGGCATCGCG TATCAATCGG CTCTCAAAGG CGTACCTGTG
CTGATGAAAG ACATCGCACC GCACTCTTTA GAGTTGGGCA TGACCGAAGC GGCCAAGCTC
CTCAACAAAC AGTTAGAGCG CGGCAAGATC GATGGATTCA AAATGGCTGG TATTCTGGCT
TCCATCACCC CTTCTCTGCA TTACGCAGGG ATTGATCAGG CGGACGTGAT TGTCGAAGCC
GTGGTGGAAA ATCCGAAAGT CAAAGCCGCG GTACTGAGCG AAGTGGAAGG ATTGGTCGAT
GCAGAAACGA TTCTGACCTC CAACACCTCG ACCATTCCCA TTAACCTGCT CGCCAAATCA
CTCAAGCGCC CACAGAACTT CTGCGGTATG CACTTCTTTA ACCCTGTGCA TCGCATGCCT
TTGGTGGAAA TCATCCGTGG TGAACACACC TCAGAAGACA CCATCAACCG AGTGGTGGCT
TATGCGGCGA AAATGGGCAA ATCACCGATT GTGGTCAATG ACTGCCCAGG ATTCTTCGTT
AACCGCGTAC TCTTCCCTTA CTTTGCAGGC TTTAGCCTAC TGATGCGTGA TGGTGCTAAC
TTCACCGAAA TCGACAAAGT GATGGAGCGT CAATTCGGCT GGCCAATGGG CCCGGCGTAT
TTGCTTGATG TGGTCGGCAT TGATACTGCA CACCATGCTC AGGCAGTGAT GGCCGAAGGC
TTCCCAACTC GCATGGCCAA ATCTGGCCGA GAAGCGATTG ATGCCCTGTA CGAAGCGAAA
AAATTTGGCC AGAAAAATGG CAGCGGCTTC TATCAGTACA CCGTTGATAA AAAAGGCAAA
CCGAAAAAAG CCTTCAGCGA TGACGTGCTC GCCATTCTTG CGCCTGTATG CGGCGCACCA
CAAAACTTTG ACCCACAAAC CCTTATCGAA CGCACTATGA TTCCGATGAT TAATGAAGTG
GTGCTCTGTC TTGAAGAAGG GATCATCGCC TCCGCGCAAG AAGCTGACAT GGCGTTGGTG
TACGGTCTTG GCTTCCCTCC GTTCCGTGGT GGTGTATTTC GTTACCTAGA TACCATAGGC
ATCGCCAACT ATGTGGCTAT GGCGGAAAAA TACGCTGACC TCGGCGCGCT CTATCAAGTA
CCGCAACTGC TGAAGAACAT GGCGCAACAA GGAACATCTT TCTACAGCGC TCAGCAAGCC
AGTGCCCTGT AA
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| Protein sequence | MIYQAKTLQV KQLANGIAEL SFCAPASVNK LDLHTLESLD KALDALAADS SVKGLLLSSD
KEAFIVGADI TEFLGLFAKP EAELDEWLQF ANRIFNKLED LPFPTLSALK GHTLGGGCEC
VLATDFRIGD ATTSIGLPET KLGIMPGFGG TVRLPRLIGA DSAMEIITQG KACRAEEALK
VGLLDAIVDS DKLIDSAITT LTQAIEEKLD WQKRRQQKTS ALTLSKLEAM MSFTMAKGMV
AQVAGKHYPA PMTSVVTIEE AARLPRDAAL DIERKHFIKL AKSTEAQALV GIFLNDQYIK
GLAKQSAKAA SQDTQHAAVL GAGIMGGGIA YQSALKGVPV LMKDIAPHSL ELGMTEAAKL
LNKQLERGKI DGFKMAGILA SITPSLHYAG IDQADVIVEA VVENPKVKAA VLSEVEGLVD
AETILTSNTS TIPINLLAKS LKRPQNFCGM HFFNPVHRMP LVEIIRGEHT SEDTINRVVA
YAAKMGKSPI VVNDCPGFFV NRVLFPYFAG FSLLMRDGAN FTEIDKVMER QFGWPMGPAY
LLDVVGIDTA HHAQAVMAEG FPTRMAKSGR EAIDALYEAK KFGQKNGSGF YQYTVDKKGK
PKKAFSDDVL AILAPVCGAP QNFDPQTLIE RTMIPMINEV VLCLEEGIIA SAQEADMALV
YGLGFPPFRG GVFRYLDTIG IANYVAMAEK YADLGALYQV PQLLKNMAQQ GTSFYSAQQA
SAL
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