Gene VC0395_A2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2506 
SymboldnaN 
ID5135873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2659354 
End bp2660454 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID640533957 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001218399 
Protein GI147674757 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.26636e-13 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCATTGAACG TAGCCACTTG ATTAAACCAT TGCAGCAGGT GTCTGGCACT 
TTAGGTGGTC GCGCCAGCTT GCCGATCTTG GGTAATTTGT TGCTCAAGGT GGAAGAGAAT
CAACTGTCGA TGACCGCCAC CGATTTGGAA GTGGAACTGA TCAGCCGTGT GACGTTAGAA
GGTGAATTTG AAGCAGGCAG TATTACCGTT CCTGCGCGTA AGTTTTTAGA TATTTGCCGT
GGTTTGCCCG ATAGTGCGGT GATCACTGTG CTGCTTGAAG GCGATCGCAT TCAAGTGCGT
TCTGGTCGTA GCCGTTTCTC ACTCGCCACC TTACCTGCCA GTGATTTTCC GAACATTGAA
GATTGGCAAA GTGAAGTGCA AGTTTCGCTC ACTCAAGCGG AACTGCGTGG CCTGATTGAG
AAAACGCAGT TTTCTATGGC CAACCAAGAT GTACGCTACT ACTTAAACGG CATGCTGTTT
GAAATTGATG GCACCACCTT GCGTTCTGTG GCGACTGATG GTCACCGTAT GGCGGTGGCG
CAAGCTCAGC TCGGTGCGGA TTTTGCGCAA AAGCAGATCA TTGTGCCGCG TAAAGGGGTG
CTTGAGCTGG TGAAATTGCT TGATGCGCCA GAGCAACCTG TGGTGCTGCA AATCGGCCAC
TCTAACTTGC GTGCAGAAGT GAATCACTTT GTGTTTACTT CGAAGCTGGT TGATGGTCGT
TTCCCTGATT ATCGCCGTGT ATTGCCGCAA CATACCAGCA AAACACTACA AACGGGCTGC
GAAGAGTTAC GCCAAGCATT TTCGCGTGCC GCGATTCTAT CGAATGAAAA ATTCCGTGGT
GTACGGGTTA ATTTGGCTGA CAACGGAATG CGCATTACCG CCAATAACCC AGAGCAAGAA
GAAGCGGAAG AGCTACTGGA TGTGAGCTTT GAAGGCGAGC CGATTGAGAT TGGCTTTAAC
GTCAGCTATA TCTTGGATGT GCTTAACACC CTGCGCTGCG ACAATGTGCG CGTTTCGATG
TCGGATGCCA ACGCCAGTGC CTTGGTGGAG AATGTCGATG ATGACAGTGC CATGTACGTG
GTCATGCCAA TTCGTCTGTA A
 
Protein sequence
MKFTIERSHL IKPLQQVSGT LGGRASLPIL GNLLLKVEEN QLSMTATDLE VELISRVTLE 
GEFEAGSITV PARKFLDICR GLPDSAVITV LLEGDRIQVR SGRSRFSLAT LPASDFPNIE
DWQSEVQVSL TQAELRGLIE KTQFSMANQD VRYYLNGMLF EIDGTTLRSV ATDGHRMAVA
QAQLGADFAQ KQIIVPRKGV LELVKLLDAP EQPVVLQIGH SNLRAEVNHF VFTSKLVDGR
FPDYRRVLPQ HTSKTLQTGC EELRQAFSRA AILSNEKFRG VRVNLADNGM RITANNPEQE
EAEELLDVSF EGEPIEIGFN VSYILDVLNT LRCDNVRVSM SDANASALVE NVDDDSAMYV
VMPIRL