| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2504 |
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| Symbol | gyrB |
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| ID | 5136439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2655807 |
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| End bp | 2658224 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533955 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001218397 |
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| Protein GI | 147673680 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.892795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACA ATTACGATTC ATCGAGTATT AAGGTACTGA AGGGTCTGGA TGCGGTACGC
AAGCGTCCGG GTATGTACAT CGGCGACACT GATGATGGCA CCGGTCTGCA CCACATGGTT
TTTGAGGTGG TGGATAACTC AATTGATGAA GCGTTGGCAG GTTACTGTAA AGACATCGTG
GTCACCATCC ACGAAGACAA CTCAGTGTCA GTCAGCGATG ACGGTCGTGG TATCCCGACC
GAAATGCATC CTGAAGAGAA AGTGTCTGCG GCAGAAGTCA TCATGACTGT ACTGCACGCC
GGCGGTAAAT TTGACGACAA CTCCTATAAA GTCTCCGGTG GTCTGCACGG GGTAGGTGTG
TCGGTGGTTA ACGCGCTTTC TGAAAAAGTG CTGCTTACCA TTTATCGTGG TGGCAAGATC
CATTCGCAAA CTTACCATCA TGGTGTGCCA CAAGCACCGT TGGCTGTGGT AGGTGAGACA
GAGCGTACCG GTACTACCGT ACGTTTCTGG CCTAGTGCAC AGACTTTTAC CAATATCGAA
TTCCATTACG ACATTTTGGC TAAACGCCTG CGTGAGCTGT CATTCCTGAA CTCTGGCGTG
TCGATCAAGC TGACCGATGA ACGTGAAGAA GATAAAAAAG ACCACTTCAT GTATGAAGGG
GGTATTCAAG CGTTTGTGAC CCACTTGAAC CGTAACAAAA CGCCAATCCA TGAGAAAGTC
TTCCACTTTA ACCAAGAGCG TGAAGATGGC ATCAGCGTGG AAGTGGCAAT GCAGTGGAAC
GATGGTTTCC AAGAAAACAT CTACTGCTTT ACTAACAACA TCCCACAGCG TGATGGTGGT
ACCCACTTAG CCGGTTTCCG TGGTGCGTTG ACCCGTACTT TGAACAACTA CATGGACAAA
GAAGGCTTCT CGAAGAAAGC GCAAGCGGCA ACCTCGGGTG ATGATGCGCG TGAAGGCTTA
ACGGCAGTGG TTTCGGTGAA AGTGCCGGAT CCTAAATTCT CAAGCCAAAC CAAAGATAAG
CTGGTTTCTT CGGAAGTAAA ATCCGCGGTT GAGTCAGCCA TGAATGAGAA GCTGGCGGAT
TTCCTAGCGG AAAACCCAAG CGAAGCGAAA AACGTTTGTT CGAAGATTAT TGATGCGGCG
CGTGCGCGTG AAGCGGCGCG TAAAGCCCGG GAAATGACTC GCCGTAAAGG CGCGCTGGAT
CTTGCTGGCT TACCCGGCAA ACTGGCGGAT TGTCAGGAAA AAGACCCAGC ATTGTCTGAA
CTCTACATAG TGGAGGGTGA CTCAGCGGGC GGTTCAGCCA AACAAGGCCG TAACCGTAAG
AATCAAGCGA TTCTGCCGCT GAAAGGTAAA ATCCTCAACG TAGAAAAAGC GCGTTTTGAC
AAGATGTTGT CTTCACAAGA AGTCGCGACC CTCATCACTG CATTAGGCTG TGGTATCGGC
CGTGATGAGT ACAACCCAGA TAAACTGCGT TATCACAACA TCATCATCAT GACCGATGCG
GACGTCGACG GCTCGCACAT TCGTACTCTG CTGTTGACCT TTTTCTACCG CCAAATGCCT
GAGTTGATTG AGCGTGGTTA CATCTACATT GCTCAGCCAC CACTGTATAA AGTGAAGAAA
GGCAAACAAG AGCAGTACAT CAAAGATGAA GAGGCGATGA ACCAGTACCA AGTGGCACTG
GCGATGGATG GTGCAGAGCT GCACGTGAAT GCCGATGCGC CAGCGTTAGC GGGTGAACCG
CTGGAGAAGC TGGTTCAGCA ATATAACGCC GCGATCAAGC TGGTTGAGCG CATGAGCCGC
CGTTACCCTT ACGCGATGCT GCATGAGCTG ATTTACGTAC CACGCATCAA TGCCGAGCTG
TGTGCGGATA AAGCCGCGGT TGAAGCTTGG ACACAGCGTT TAGTCGAACA GTTGAATGCT
AAAGAAGTGG GTGCGAGCCA ATACAGCGTT CTGGTTGAAC ACAATGCTGA GCTGAATGTG
TACTTGCCAA AAATTCAGGT GCGTACTCAC GGTGTGACTC ATGAATACTT ACTGAGCGCG
GATCTGATCA ACTCGAAAGA GTACGCTAAG TTAGCCGATC TGTCGGAAGC GCTGGACGGT
TTGATTGAAG CGGGAGCGTT TATCAAACGT GGTGAGCGAG TACAACCGAT CAGCAGCTTT
GCCGCCGCGC TGGATTGGCT GATCAAAGAG TCGCGCCGCG GTCTGTCTAT CCAACGCTAT
AAAGGTCTGG GCGAAATGAA CCCTGATCAG CTGTGGGAAA CTACGATGGA TCCAGAAACG
CGTCGTATGA TGCAAGTCAC TATCGAAGAT GCGGTAGGCG CGGACGAACT GTTCACGACG
CTCATGGGCG ATCAAGTTGA ACCACGTCGT GCATTTATCG AAACCAACGC ACTGAAAGTG
GCCAACCTCG ACGTATAA
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| Protein sequence | MSNNYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNSIDE ALAGYCKDIV
VTIHEDNSVS VSDDGRGIPT EMHPEEKVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKV LLTIYRGGKI HSQTYHHGVP QAPLAVVGET ERTGTTVRFW PSAQTFTNIE
FHYDILAKRL RELSFLNSGV SIKLTDEREE DKKDHFMYEG GIQAFVTHLN RNKTPIHEKV
FHFNQEREDG ISVEVAMQWN DGFQENIYCF TNNIPQRDGG THLAGFRGAL TRTLNNYMDK
EGFSKKAQAA TSGDDAREGL TAVVSVKVPD PKFSSQTKDK LVSSEVKSAV ESAMNEKLAD
FLAENPSEAK NVCSKIIDAA RAREAARKAR EMTRRKGALD LAGLPGKLAD CQEKDPALSE
LYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKLR YHNIIIMTDA DVDGSHIRTL LLTFFYRQMP ELIERGYIYI AQPPLYKVKK
GKQEQYIKDE EAMNQYQVAL AMDGAELHVN ADAPALAGEP LEKLVQQYNA AIKLVERMSR
RYPYAMLHEL IYVPRINAEL CADKAAVEAW TQRLVEQLNA KEVGASQYSV LVEHNAELNV
YLPKIQVRTH GVTHEYLLSA DLINSKEYAK LADLSEALDG LIEAGAFIKR GERVQPISSF
AAALDWLIKE SRRGLSIQRY KGLGEMNPDQ LWETTMDPET RRMMQVTIED AVGADELFTT
LMGDQVEPRR AFIETNALKV ANLDV
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