Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2477 |
Symbol | trkH-1 |
ID | 5136136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2628780 |
End bp | 2630225 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533928 |
Product | potassium uptake protein TrkH |
Protein accession | YP_001218370 |
Protein GI | 147673732 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAACT TACGCCCAAT TACGTTTATC ATCGGGCTAG TGCTGTCTAA GCTAGCCCTA TTCATGTACG TGCCGACTCT AGTGGCATTT TTTACTGGCA GCGGCGGTTT TCTCGATTTC GCGCAAGCCG TCATCATTAC CCATCTGGTG GCGTTTCTCT GCTTAAGTAT CGGTCGCACT GAACATTTTC GGCTCAACGT ACGTGATATG TTCCTGATCA CCAGCTTGGT ATGGACGATT GCCAGCGCAT TTGCTGCTCT GCCTTTTGTG TTTATTAACC ACATCAGCTT TACCGATGCC TATTTTGAAA CCATGTCCGG CCTTACCACC ACAGGCTCCA CGGTACTCAG TGGCTTAGAT GATATGCCGC CCAGTATTTT GTTGTGGCGC TCCATTTTGC AATGGTTAGG TGGCGTGGGC TTTATCGTGA TGGCGGTAGC GGTGTTGCCG ATGCTCAATG TTGGGGGGAT GAAGCTGTTC CAAACCGAAT CGTCTGATTG GTCGGATAAA AGCAGCCCGC GCGCGAAAAC CGTCGCGAAA AACATTGTGG CGGTGTATCT GGTTTTGACT GGGCTCTGTT TTTTGAGCTA TATCGCCACA GGTATGACGC CGTTTGAAGC GATTAATCAC GCCTTTACCA CGCTTTCCAC CGGCGGCTAC TCGACCAGTG ATAGCTCGAT GAACCGCTTC TCACACGGCG CGCACTGGGT TGGCACACTC TTTATGTTTC TTGGTGGCCT GCCATTTTTA CTGTTTGTGC AGGCTCTGCG CAAACAGAGT GCACGAGCCC TACTCAAAGA TGAGCAGGTA CGCGGCTTCT TCTGGCTCTT TATGATCTCC AGTTTGCTGG TCGCAGGTTG GTTGTGGCTC AAAAACGATT ACGCGATATT GGATGCGCTG CGAGTTTCGA TGTTTAACAT TGTCTCCGTC GTCACAACCA CGGGCTATGG TCTGGATGAT TTCACCGCGT GGGGCGCGCT CCCCTCAACC ATTTTTGCCT TCCTATTGAT GGCCGGCGCT TGCTCGGGTT CTACCTCTGG CGGAATTAAG GTCTTTCGTT TCCAAATCGC GATGGCACTG CTCAAAAAGC AACTGCTGAA CCTCATCCAC CCTTCTGGCA TTTTTATCCA GCGCTATAAC AAGCGCCCGG TCAATGAAGA GATCATCCGC TCCGTAGTCG CCTTTGGCTT GACGTTTTTC ATCACTATCG TGGTACTGGC TGGCGCGTTA TCGGCAATGG GATTGGATTC GGTGACCAGT ATCTCTGGCG CGGTCACTGC CGTGGCTAAC GTGGGTCCAG GTATGGGCAG CATCATTGGC CCAACGGGTA ACTTTGCCCC TCTACCGGAT GCCGCCAAAT GGCTCTTGAG CTTTGGAATG TTGATGGGAC GTTTAGAAAT TCTGACGATT TTGGTGCTCT TTTTCCCTGC ATTCTGGCGT CATTAA
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Protein sequence | MLNLRPITFI IGLVLSKLAL FMYVPTLVAF FTGSGGFLDF AQAVIITHLV AFLCLSIGRT EHFRLNVRDM FLITSLVWTI ASAFAALPFV FINHISFTDA YFETMSGLTT TGSTVLSGLD DMPPSILLWR SILQWLGGVG FIVMAVAVLP MLNVGGMKLF QTESSDWSDK SSPRAKTVAK NIVAVYLVLT GLCFLSYIAT GMTPFEAINH AFTTLSTGGY STSDSSMNRF SHGAHWVGTL FMFLGGLPFL LFVQALRKQS ARALLKDEQV RGFFWLFMIS SLLVAGWLWL KNDYAILDAL RVSMFNIVSV VTTTGYGLDD FTAWGALPST IFAFLLMAGA CSGSTSGGIK VFRFQIAMAL LKKQLLNLIH PSGIFIQRYN KRPVNEEIIR SVVAFGLTFF ITIVVLAGAL SAMGLDSVTS ISGAVTAVAN VGPGMGSIIG PTGNFAPLPD AAKWLLSFGM LMGRLEILTI LVLFFPAFWR H
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