| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2472 |
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| Symbol | |
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| ID | 5135090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2623253 |
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| End bp | 2624428 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533923 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218365 |
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| Protein GI | 147674460 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTCTC CGAAACCCAG TCATTTTTTC GACCAAGGAA GCAAGGTCAT GGCACGATTA
ACCCGTTATA TTACCTACGC TTTATTGCCT TTCACTCTGC TCAGTGGACA GGTGACCGCC
GATGAGCAAA CGCCGCTGGC ACTCAAACCA AATGCACCGA CCACCTATAC CGTGGTGAAA
GGTGACACCT TGTGGGATAT TTCCGCTTTG TATCTCGACA GTCCATGGCT GTGGCCAAGA
CTTTGGCAAG TGAACCCAGA AATTGATAAC CCACATTTGA TCTACCCCGG TGATAAATTG
ACGCTGTTTT GGCGTGATGG GCAACCCGTA CTCAGTCTAA AACCGATGCG CAAACTGAGC
CCGCAAGTGC GTGTGTTGGA GAAACAAGCT GTTCCGACTG TGCAAGAAGG CTTGGTGCTG
CCTTATTTAC AATCTGACCG TTTGATGGCG AAAACCGCCT TGCAAGGTAG CGTGCGTGTG
ATTGGCTCCA GTGAGGGGCG TCAATATCTC ACCAAGCAAG ATCAGCTTTA CATCTCCGGT
GTACACAGCG AGAAAAAGTG GGGGATTTAT CGCGAGGTAG CACAGTATCA ACGTGATGAT
GAAGTCATGG TGGCGCTGCG TTTAGTGGCG GTGGGTGAAT TGGCGATGAC TGGGGGCAAC
TTTAGTGGAC TAAGCTTGCT AGAGCAAAAT CAAGAGATTT TAGCCAATGA TATTGCTTTG
CCAGAAGTCG ATCTTGAGGA GCGCCAACTG TCGACAACCT TCTATCCGCA GCCAGCGCCT
GCAGGGAGTG AAGCTCGCAT TCTGGGTTCG CTTGAAGGGA GTCAATACGC CGGACAGAAT
CAAGTGGTGG TGATTGACCA AGGCCGCAGT GATGGCGTCG CGCAAGGCAG TATGTTTGAA
CTGTATCAAG CCGCAGTCCA AGTCAAAGCT AAGCAAGATT CGTCTACTTT CCTGTCTGAG
CGTTCGAACA CGGACGTACA GTTACCAAGT GTAAAAGTGG GCGCTTTGAT GGTGATTCGC
CCTTATGAGC GTTTTAGCTT GGCACTGATT ACTAACAGTT CGGCACCGAT CAGTGCTGAA
GTGCACGCAC TGTCTCCGCA GGCAGAGCCT CAAACCGAGC AGCCAGATGT AGTGCAATTG
TCTGAACAAA TCGATTTGGT TGATGATGCC AGTTAA
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| Protein sequence | MISPKPSHFF DQGSKVMARL TRYITYALLP FTLLSGQVTA DEQTPLALKP NAPTTYTVVK
GDTLWDISAL YLDSPWLWPR LWQVNPEIDN PHLIYPGDKL TLFWRDGQPV LSLKPMRKLS
PQVRVLEKQA VPTVQEGLVL PYLQSDRLMA KTALQGSVRV IGSSEGRQYL TKQDQLYISG
VHSEKKWGIY REVAQYQRDD EVMVALRLVA VGELAMTGGN FSGLSLLEQN QEILANDIAL
PEVDLEERQL STTFYPQPAP AGSEARILGS LEGSQYAGQN QVVVIDQGRS DGVAQGSMFE
LYQAAVQVKA KQDSSTFLSE RSNTDVQLPS VKVGALMVIR PYERFSLALI TNSSAPISAE
VHALSPQAEP QTEQPDVVQL SEQIDLVDDA S
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