Gene VC0395_A2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2469 
Symbol 
ID5137068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2621077 
End bp2621649 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content49% 
IMG OID640533920 
Producttopoisomerase DNA-binding C4 zinc finger domain-containing protein 
Protein accessionYP_001218362 
Protein GI147673250 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTATGA GTCGTAAAAT TGACCCGCAA CTGTTTGCCG CTCATGAGCA TGCGCTGCAA 
TCTTCCCCTT GTCCGCAATG TGGCGCAGCA TTACAACTGC GCCACGGCAA ACATGGTCCT 
TTTTTAGGTT GCACTGCATA CCCAGAGTGT GACTACATCA AACCTCTGCA TCAAAATGAT 
GGGCATATCA TCAAAGAACT CGGTGTGCCT TGCCCTGAAT GTGGACATGA ACTGGTGCTG 
CGCCAAGGTC GTTACGGGAT GTTTATTGGC TGTAGCCACT ACCCGCAGTG CCACCATATC 
GAGTCGATGG ATTCCCCTTC GCAAGAGGAA ACATCGCCAG ATATCCTTTG CCCGGAATGC 
GGCAAAGGCC ACCTTATCGA ACGCAAATCT CGCTTCGGTA AACTGTTTTA TGCGTGTGAT 
GCGTATCCTA AGTGTAAGTT TGCTTTAAAT AGTAAACCGA TTGCTCAGGC TTGTGCTCAG 
TGTGGCTTTA CGGTGATGGT GGAAAAGAAA AGTGCAGCAG GCATGCGCTA TCAATGCGCT 
AATCGTCAAT GTGGGCATAT TCAGGAATGC TAG
 
Protein sequence
MSMSRKIDPQ LFAAHEHALQ SSPCPQCGAA LQLRHGKHGP FLGCTAYPEC DYIKPLHQND 
GHIIKELGVP CPECGHELVL RQGRYGMFIG CSHYPQCHHI ESMDSPSQEE TSPDILCPEC 
GKGHLIERKS RFGKLFYACD AYPKCKFALN SKPIAQACAQ CGFTVMVEKK SAAGMRYQCA 
NRQCGHIQEC