| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2445 |
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| Symbol | |
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| ID | 5135381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2598780 |
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| End bp | 2599982 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533897 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_001218345 |
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| Protein GI | 147675656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAG CAATGCCATC TCAGGTCAGT AAGCAGCAAA TGGTGCTACT GACACTACTC
GTTCTATTTA GCCCATTGGC GATCGATATT TATCTACCGG CATTGCCTCA AATATCACAA
GCGTTTCACG TGGAACACGC TTTAGCACAA GATACGATTA CCTGGTTTTT GTTTGCGATG
GGCGTCGGGC AGTTATTTGC TGGCCCATTA GCAGATAAGT ATGGTCGACG AACTGTTGCA
TTAGGGGGCA TTAGCATTTA TGCCTTGAGC GCTTTATTGG CGTGGAGTGC TCAAAGTATT
GAATGGATGT TAATGGCTCG GTTGCTACAA GGCTTAGGAG CGTGTGCGAC TTCCGTAGCA
GCTTTTGCAA CAGTTCGCGA TTTATTTGGG CCGCAACGCA GCGGTAAGAT GATCAGTTAC
CTCAATGGAG CGATCTGTTT TATTCCGGCA CTCGCGCCGA TTCTGGGCAG TTGGTTAACT
CAGCAATTCG GTTGGCGAGC AAACTTCAGT TTTATGACCG GATTTGCGCT GCTGGTAGGG
TTAGCCATGG CTCTACGTCT GCAGGAGAGT AATCCGTACA TGGGCAGTCG ACCTGCCGTC
TTTAAGCTCT CTCGTTATGC CGCCGTATTA AAAGCGCCGA CCTTCCTCTT CCACGCATCG
CTGTGTCTGC TGGCGATGGC GGTGATTCTC GCTTACGTGA CCTCCGCGCC AGTGATTCTC
ATGGAGCGTT TACAGCTCAG CATGAATGAA TTCACCTTCT GGTTTGGCGT TAATGCGGTG
ATCAATATCA TTGCCTGCAT GACGGCCCCC AAAGTGATGG ATAAATTGGG TACTCGTTGG
TCTTTGATCA TTGGCATTAC TACGTTAATG ATCGCTGGCA GTCTAATGCT GGTGCTGCGT
AATCAGGCAA GCGCACTGGC GTTCATGTTG CCAGTGTTTT TATCATCGAT TGGTTTTGCA
TGGATACTGG GCGCAGCCGC CGGTAAAGCG TTAGCTCCGT TTGGCGATAA AGCCGGTACG
GCGGCGGCAT TGCTCGGACT ATTCCAGATG AGTGGTTCTG GGCTATTGGT CGGTACGTTG
CAACGCATTA TGCCTGAGCC GCAACTACTG ATCGGTTTGA CCATGTGGCT AGCGGCACCT
GCGTTACTCA TTTTATTCTC ACCGCTTGGT TTTCGTTGGC ACGCCAGTGT CTCTGAGTGT
TGA
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| Protein sequence | MKQAMPSQVS KQQMVLLTLL VLFSPLAIDI YLPALPQISQ AFHVEHALAQ DTITWFLFAM
GVGQLFAGPL ADKYGRRTVA LGGISIYALS ALLAWSAQSI EWMLMARLLQ GLGACATSVA
AFATVRDLFG PQRSGKMISY LNGAICFIPA LAPILGSWLT QQFGWRANFS FMTGFALLVG
LAMALRLQES NPYMGSRPAV FKLSRYAAVL KAPTFLFHAS LCLLAMAVIL AYVTSAPVIL
MERLQLSMNE FTFWFGVNAV INIIACMTAP KVMDKLGTRW SLIIGITTLM IAGSLMLVLR
NQASALAFML PVFLSSIGFA WILGAAAGKA LAPFGDKAGT AAALLGLFQM SGSGLLVGTL
QRIMPEPQLL IGLTMWLAAP ALLILFSPLG FRWHASVSEC
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