| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2409 |
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| Symbol | polI |
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| ID | 5137879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2563376 |
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| End bp | 2566180 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533862 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001218310 |
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| Protein GI | 147675220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000078353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCATA TACCTGACAA TCCATTGATT TTGATCGACG GCTCCTCTTA CCTTTATCGC
GCATTTCATG CTTACCCGGG CACCATGAGT AATGGTGAAA TCCCAACCAA CGCCATCTAT
GGTGTGGTAA ACATGATTCG CAGCATGATG CGCCAGTTCG CTTCGGATCG CATGGCGGTG
ATTTTTGATG CCAAGGGAAA AACCTTCCGT GATGAGATGT ACGATCAATA CAAGGCTCAT
CGTCCTCCTA TGCCAGATGA GTTGCGCTGT CAGGTTGAAC CTTTACACCA AGTTATTCGC
GCTATGGGTT TACCGCTGTT GGCGATTGAA GGTGTAGAAG CTGACGATGT GATTGGTACG
TTGGCGCGCC AAGCCTCACA AGCTGGTATG CCTGTTTTGA TCAGTACCGG CGATAAAGAT
ATGGCGCAGT TGGTGGATGA TAATATTACC CTGATCAATA CCATGACCAA CGTCGTGCTG
GATCGCGAAG GTGTGATTGA AAAATTCGGT ATCCCGCCAG AGCTTATTAT CGACTACCTC
GCCTTGATGG GTGATAAAGT GGATAACATT CCGGGCGTAC CTGGGGTGGG TGAAAAAACC
GCGACCGCAC TTTTGCAAGG GATTGGCGGC TTAGAAGCGC TGTACGCCAA CCTCGATAAA
ATCGCTGCTT TAGGCTTCCG TGGCTCAAAA ACCATGGCAC AAAAGCTGGA AGAGAACCGC
GGTAATGCCA AGCTTTCTTA TCAACTCGCC ACCATCAAAT GTGATGTCGA GCTTGAGGAA
TCTCCGCAAA CCCTGCTAAA GCAAACGCCA GATCGAGATG CGTTGATGTC GCTCTACGGT
AAGCTCACCT TTAAATCTTG GCTGACCGAA TTGCTTGATG GTGGTACAGG TATTGTGACG
GCGGACGAGC AAACGAAAAC CTCTTCAGTT ACTGTTTCAA CCGCAGCAAC TCATGCGGCT
GCGATTCCTG AAAGCCCTGC GGCCCACATC GATCGCAGCC AGTATCAAAC CATCCTAAAC
GAACAAGACT TCCAGCTTTG GTTAGAGAAG TTAAAACAAG CCGAGCTGTT TGCCTTTGAT
ACGGAAACCG ACAACCTTGA TTACATGGTC GCCAATTTGG TGGGGATGTC GTTTGCAGTT
GCCGAAGGTG AAGCGGCTTA TCTGCCAGTT GCGCACGATT ATCTGGATGC GCCGCAGCAG
TTGGAGCGCG ACTGGGTGAT TGCCCAGCTA AAACCTCTGC TTGAAGATGA AAGCAAAGCC
AAAGTGGGCC AAAACCTCAA ATACGATGCG AGCGTGATGG CGCGCTACGG CGTTGAGCTG
CGTGGTATTC GCCATGACAC TATGCTGCAA TCCTACGTCT ATAACAGCGT GGGCGGCAAA
CATGATATGG ATAGTTTAGC GCTGCGTTTT TTACAGCACA GCTGTATCTC GTTTGAACAA
GTGGCAGGTA AGGGTAAGAA CCAGCTCACC TTTAACCAAA TCGCTTTAGA AGAAGCGGCA
CAATACGCGG CAGAAGATGC GGATGTGACG TTGCGTCTGC ATCAGCGAAT TCATCCGTTG
ATTGAGCAAG ACGCTAAGCT TGAGCAAGTG TATCGCGAAA TCGAAATGCC GCTGGTACCT
GTGCTATCAC GTATTGAACG TACGGGCGTG ATGATCGACG ACATGCTGCT CAGTGCCCAA
TCGCAAGAAA TTGCGTTACG TTTAGATCAA TTAGAACAAA ATGCTTATGA GTTGGCAGGT
CAGCCGTTCA ACTTAAGCTC GCCGAAGCAG CTACAAACCA TTTTGTTTGA GCAGATGAAG
CTGCCTGTCT TGCAAAAAAC GCCATCCGGT ACCCCTTCAA CCAATGAAGA AGTGTTGCAA
GAGCTGGCTT TGGATTACCC ACTGCCCAAG GTTCTGATTG AGTACCGCGG TCTGGCCAAA
CTCAAATCGA CCTATACCGA TAAGTTGCCG AAGATGATTA ACCCAAGTAC AGGGCGCGTG
CATACTTCCT ATCATCAAGC AGTGACGGCC ACTGGGCGTC TCTCCTCCAC TGATCCTAAC
TTGCAGAACA TTCCAGTGCG TAATGAAGAA GGACGCCGTA TTCGCCAAGC GTTTGTTGCT
CCGCATGGTT GGAAAATCAT GGCGGTCGAC TACTCGCAAA TCGAGCTGCG CATCATGGCG
CACCTGTCGG GCGATCAGGC GTTATTGGAT GCTTTCCGTG ATGGGAAAGA TATCCATGCG
GCGACAGCAG CAGAAATCAT TGGTGTGCCG ATTGATCAAG TGAGCAGTGA GCAGCGTCGC
CGAGCGAAAG CGGTGAACTT TGGTTTGATC TACGGCATGA GTGCGTTTGG TCTGGCAAAA
CAGCTCGGTA TTCCACGCGG TGAAGCACAA GAGTATATGG ATAAATACTT TGAGCGTTAT
CCCGGCGTGA TGCAGTACAT GGAAGATACG CGTAGCCGTG CTGCACAATT GGGTTATGTC
GAAACCATCT TCGGTCGTCG CTTACATTTG CCGGAAATCA CCTCACGTAA CGCTATGCGT
CGCAAAGCGG CTGAGCGGGC AGCGATCAAC GCACCGATGC AAGGCACCGC GGCAGACATC
ATCAAAAAAG CCATGTTGTT GGTGGATGAG TGGATTGAGC GGGAAGGTGA TGGCCGAGTC
AAATTGCTGA TGCAAGTACA CGATGAATTG GTCTTTGAAG TTAAAGAGTC ATCTTTATCC
GAAATTGAAA GTAAAGTACA ACAGCTGATG GAGTCAGCGG CCGAGCTTGC AGTACCTTTA
GTGGCCGAAG CCGGCCACGG CGACAACTGG GAGCAGGCGC ACTAG
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| Protein sequence | MAHIPDNPLI LIDGSSYLYR AFHAYPGTMS NGEIPTNAIY GVVNMIRSMM RQFASDRMAV
IFDAKGKTFR DEMYDQYKAH RPPMPDELRC QVEPLHQVIR AMGLPLLAIE GVEADDVIGT
LARQASQAGM PVLISTGDKD MAQLVDDNIT LINTMTNVVL DREGVIEKFG IPPELIIDYL
ALMGDKVDNI PGVPGVGEKT ATALLQGIGG LEALYANLDK IAALGFRGSK TMAQKLEENR
GNAKLSYQLA TIKCDVELEE SPQTLLKQTP DRDALMSLYG KLTFKSWLTE LLDGGTGIVT
ADEQTKTSSV TVSTAATHAA AIPESPAAHI DRSQYQTILN EQDFQLWLEK LKQAELFAFD
TETDNLDYMV ANLVGMSFAV AEGEAAYLPV AHDYLDAPQQ LERDWVIAQL KPLLEDESKA
KVGQNLKYDA SVMARYGVEL RGIRHDTMLQ SYVYNSVGGK HDMDSLALRF LQHSCISFEQ
VAGKGKNQLT FNQIALEEAA QYAAEDADVT LRLHQRIHPL IEQDAKLEQV YREIEMPLVP
VLSRIERTGV MIDDMLLSAQ SQEIALRLDQ LEQNAYELAG QPFNLSSPKQ LQTILFEQMK
LPVLQKTPSG TPSTNEEVLQ ELALDYPLPK VLIEYRGLAK LKSTYTDKLP KMINPSTGRV
HTSYHQAVTA TGRLSSTDPN LQNIPVRNEE GRRIRQAFVA PHGWKIMAVD YSQIELRIMA
HLSGDQALLD AFRDGKDIHA ATAAEIIGVP IDQVSSEQRR RAKAVNFGLI YGMSAFGLAK
QLGIPRGEAQ EYMDKYFERY PGVMQYMEDT RSRAAQLGYV ETIFGRRLHL PEITSRNAMR
RKAAERAAIN APMQGTAADI IKKAMLLVDE WIEREGDGRV KLLMQVHDEL VFEVKESSLS
EIESKVQQLM ESAAELAVPL VAEAGHGDNW EQAH
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