Gene VC0395_A2407 details

Gene Information

• Locus tag: VC0395_A2407
• Symbol: engB
• ID: 5135671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2561967
• End bp: 2562629
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640533859
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001218307
• Protein GI: 147674030
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.61666
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGTAA AAATTCATTA CCAAAACACG CATTTCATTA CCAGTGCGCC TGATATTCGC 
CATCTTCCTG AAGATGAAGG TATCGAAATT GCGTTTGCAG GACGCTCTAA TACTGGTAAG 
TCAAGTTCCC TTAATCGCCT GACCAACCAG AAAAATCTGG CCAAAACCAG TAAGACTCCG 
GGTCGTACGC AGTTGATTAA CCTTTTTAAA GTAGCAGACG GCTGTCATAT CGTCGATTTG 
CCCGGATATG GCTTTGCTCA AGTCCCGCTA GAGATGAAGC TCAAGTGGCA GCGAGCCCTT 
GGTGAATACT TACAAAAGCG CCAAAGCCTA AAAGGCTTAG TGGTACTGAT GGATATTCGT 
CATCCGATGA AAGACCTCGA TCAGCAACTG ATCATCTGGG CGGTAGAGTG CGGAATTCCA 
GTACAGGTGA TGCTGACTAA AGCGGATAAG CTAAAAAGTG GCGCTCGTAA AGCACAAGTA 
TTGAAAGTGC GTGAAGAGGC AAAAACCTTT GGTGGCGATG TGGCCGTTGA TGCTTTCTCT 
TCATTAAGCG GAATTGGTGT CGATACTCTG CGCGCCAAAC TGGATGAGTG GTATGCACCG 
ATGTTGGCAG CTCTTGCCGA ACAAGAAGAA GGCGAGCAGC CTGAATCGTC TACCGACCAA 
TAG 

 

Protein sequence

MSVKIHYQNT HFITSAPDIR HLPEDEGIEI AFAGRSNTGK SSSLNRLTNQ KNLAKTSKTP 
GRTQLINLFK VADGCHIVDL PGYGFAQVPL EMKLKWQRAL GEYLQKRQSL KGLVVLMDIR 
HPMKDLDQQL IIWAVECGIP VQVMLTKADK LKSGARKAQV LKVREEAKTF GGDVAVDAFS 
SLSGIGVDTL RAKLDEWYAP MLAALAEQEE GEQPESSTDQ