| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2398 |
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| Symbol | hemC |
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| ID | 5135663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2553564 |
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| End bp | 2554517 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533850 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001218298 |
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| Protein GI | 147675270 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0564467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGGA ACATCATAAT GACCGAGACG CCGATTCGCA TTGCAACCCG CCAGAGTCCA
CTGGCTTTGT GGCAAGCCAA CTATGTTAAA GACGCCTTAA TGGCAGCCCA CCCCGGACTG
CAGGTGGAGT TGGTGACTAT GGTCACGCGC GGCGATGTGA TTCTGGATAC TCCACTGGCT
AAAGTGGGCG GTAAAGGCTT ATTCGTGAAA GAGCTGGAAA TTGCCATGCT CGAAGGGCGC
GCCGATTTAG CCGTGCATTC AATGAAAGAT GTTCCGGTCG ATTTCCCTGA CGGTCTGGGC
TTAGTCACCA TCTGCGAACG GGAAGATCCG CGTGATGCGT TTGTCTCAAA TACCTACGCC
AAGATTGAAG ATCTGCCCTC GGGCGCTATC GTCGGTACCT GCAGTTTACG CCGTCAATGC
CAACTCAAAG CGGCACGGCC AGATTTAGTG ATTAAAGAGC TGCGCGGCAA CGTGGGGACT
CGCCTAAGTA AGCTTGATGC GGGCGAATAC GATGCCATCA TTTTAGCGGC AGCAGGCCTA
AAACGCCTTG AGCTCGAAAG CCGTATTCGT AGCTTTATTG AACCGGAACA GTCCCTACCT
GCAGTTGGCC AAGGTGCCGT TGGTATTGAA TGTCGCGTGA ATGATCAACG CGTGCGCGCC
CTACTCGCAC CTCTTAACCA TGCTGATACC GCCGATCGAG TGCGCTGCGA ACGCGCGATG
AATCTCACGT TACAAGGTGG CTGTCAGGTG CCGATTGGTA GCTATGCACT GCTGGAGGGT
GACACTATTT GGCTACGCGC TCTTGTGGGT GAACCCGATG GTTCGCAAAT CGTGCGCGGC
GAAATTCGCG GACCTCGCAC ACAAGCTGAG CAACTTGGCA TCACGCTGGC TGAGCAACTG
CTTAGCCAAG GAGCCAAAGA GATCTTGGAG CGTCTCTACT GTGACCACGA ATAA
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| Protein sequence | MDRNIIMTET PIRIATRQSP LALWQANYVK DALMAAHPGL QVELVTMVTR GDVILDTPLA
KVGGKGLFVK ELEIAMLEGR ADLAVHSMKD VPVDFPDGLG LVTICEREDP RDAFVSNTYA
KIEDLPSGAI VGTCSLRRQC QLKAARPDLV IKELRGNVGT RLSKLDAGEY DAIILAAAGL
KRLELESRIR SFIEPEQSLP AVGQGAVGIE CRVNDQRVRA LLAPLNHADT ADRVRCERAM
NLTLQGGCQV PIGSYALLEG DTIWLRALVG EPDGSQIVRG EIRGPRTQAE QLGITLAEQL
LSQGAKEILE RLYCDHE
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