Gene VC0395_A2369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2369 
Symbol 
ID5137397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2525874 
End bp2526515 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID640533821 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_001218269 
Protein GI147675303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000000000123396 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGT TGGGAATCCG AGCACAACAA AAAGAAAAGA CGCGCCGCTC TTTAATTGAT 
GCCGCGTTTA GCCAACTGAG CGCTGACCGA AGTTTCTCTA ACCTGAGTCT ACGTGAAGTC 
GCCCGAGAAG CGGGCATTGC GCCGACCTCG TTTTATCGTC ACTTCAAAGA CATGGATGAA 
CTGGGTTTAA CCATGGTGGA TGAAGGTGGT CTGTTATTGC GTCAGTTGAT GCGTCAAGCT 
CGCCAGCGCA TCGTCAAGGA AGGCAGTGTG ATCCGCACTT CAGTGGAAAC CTTTATGGAG 
TTCATTGAGA GCAGCCCTAA CGTATTTCGT TTGTTGTTGC GAGAACGTTC TGGCACTTCC 
TGCGAGTTTC GAGCGGCGGT AGTGCGTGAA ATTCAACACT TTGCGGCTGA GCTCACCGAA 
TATCTGGTTG CCACAGGGAT GACGCGGGAA GAGGCGATGA CTCAAGCAGA AGCTTCCGTC 
ACCTTGGTCT TTAGTTCAGG CGCAGAAGCG CTCGATTTGG ATCGCCGTGA ACGCGATGAA 
CTGGCCGAGC GTTTGATCAT GCAACTGCGC ATGCTGGCCA AAGGGGCACA TTGGTATCGT 
AAAGAGCGTG AACGTCATCG CCTGAAAGGC GCGTTGGAAT AA
 
Protein sequence
MKSLGIRAQQ KEKTRRSLID AAFSQLSADR SFSNLSLREV AREAGIAPTS FYRHFKDMDE 
LGLTMVDEGG LLLRQLMRQA RQRIVKEGSV IRTSVETFME FIESSPNVFR LLLRERSGTS 
CEFRAAVVRE IQHFAAELTE YLVATGMTRE EAMTQAEASV TLVFSSGAEA LDLDRRERDE 
LAERLIMQLR MLAKGAHWYR KERERHRLKG ALE