| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2354 |
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| Symbol | |
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| ID | 5137878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2505523 |
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| End bp | 2507220 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640533806 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218254 |
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| Protein GI | 147675720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACATCA AAAAGGTAAC GATCAAAAAC TACCGCAGCT TCCGCTTTTT CGAAGCACAG
CTTCAGCAGC TAACAGTTGT CATTGGTGAA AACGATACTG GTAAGACGAA CTTTTTCACC
GCACTTTCGT TACCGTTAAG CGGCAACCAA ATAGACTTCA ACCAGAAGCG ATTGAGTGTC
TCAGACATTA ACAAAGATGC CGTGATTGAT TTTCTAAAGT CTGTTGTCGA TGATGACACT
GAAGATAATC AGCTTACAAA GATCCCTAAA GTATCCGTAA CCGTAGAGTT CGCAGATCCG
AAAGATGCTT ATGAAACAGC TCTGTTGGCT AAGTGGATTG TTGCTGATGG AGGCGAAGAA
ACATACAAAA TTAGATACGA CTTTAAGCCT AAAGACGACA AAGACTTGCT TGAGGTTGTA
AAGAAATCGC TCGCTGGTAA GACTTTAGAT GATATTAACT GGTTTACTCT ACCCGTTGAG
CTTTACGACT ACCAAGTCGT ATCTGTGAAC AACGAAAAGC CTATCGCATA CAGTGACTTA
AAACACGTCA GTATCCATAG TATCAATGCA GAGCGAGATG ACTTCTCAGA AAGCAGTTCA
ATGAAGTCCA ATAGCATTTT CACCAAGCTG CTTATGAACA CTCTCAACGA TGACGACAAA
GGTCAGATCA ATACAGCCTA CTCTGAGTTC TTTAGTGCTA TTGAAAAGAC TGAAACATTC
GACAAAGTCA TTGGAGCTAA TGACGATTTT GAGAATTACG ACAGTATTAT CAAACAGCTT
GAGTGCACTC CTAACCTGCC TAATTTGAAG AACATCTTAT CGAACATCAC TTTGAAATAC
GGTAATGAAT TTCTGTACCA AAAAGGCTTA GGGCAACGAA ATCTTATCTA CATACTCATC
CTGTTTGCTT ACTACAAGTC ATGTGGTGAT ACATTCAACT TGTGCTGTAT AGAAGAACCA
GAAGCACACT TGAGCGTTAA CAACCTTCGT TTAGTAAGAG ACTTCATTGA GAAAAGCTCA
AGCAACAGCG GCTCGCTTGT ACAAACTATC ATTTCGACCC ATAACCCATC GATCATCAAC
AAGTTGAAGC TTTCTAATGT GTTGGCGTTT ACTGGCGAGA AAGCAATTAG TCTGTCTGAT
ACTCCAACTA AGCTAGTTGA CTACCTAAGA AAGAGACCTA ACTTCGACAT CTTAAAGCTG
CTGTTTGCGA ACAAAGTAAT TCTCGTAGAG GGGCCGACTG AAGAAATGCT AATCAGCACT
TATCTGTCTA AACAACCAGC CCTCAACGAC ATCGATATTA TTCCAATTGG TCAACGTGGT
TACGCCACTT TCTTAGATAT ATGGCTAGCC TTGAACAAAG ATAACCAGAA TAAGAAAATT
GGTGTTGTCC GTGATTATGA CAATTCAGAT GCGGCTAAAG CCAAACATGA TACCTATGAC
ACAGCGCATG CGAATGTCAC TGTAAGAACA ACAACAAACT ACACACTTGA AATTGATTTA
GTAGAAGCAG AAGACAACCT AGCTTTACTA AATGATTTAT TCGAAATGGA AGGCGACCTC
GACGCAGTAT CCAAGCACAT GATTAATGGT AAGACAGCAA GAATGCTTGA TGTATGTGAT
GCGATGGTTG ATGAAGAGAA TCCACTGGAT ATCAAGTTAC CAGCTCACAT CGCTGAGGTC
ATCGAGGCGG TATCATGA
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| Protein sequence | MYIKKVTIKN YRSFRFFEAQ LQQLTVVIGE NDTGKTNFFT ALSLPLSGNQ IDFNQKRLSV
SDINKDAVID FLKSVVDDDT EDNQLTKIPK VSVTVEFADP KDAYETALLA KWIVADGGEE
TYKIRYDFKP KDDKDLLEVV KKSLAGKTLD DINWFTLPVE LYDYQVVSVN NEKPIAYSDL
KHVSIHSINA ERDDFSESSS MKSNSIFTKL LMNTLNDDDK GQINTAYSEF FSAIEKTETF
DKVIGANDDF ENYDSIIKQL ECTPNLPNLK NILSNITLKY GNEFLYQKGL GQRNLIYILI
LFAYYKSCGD TFNLCCIEEP EAHLSVNNLR LVRDFIEKSS SNSGSLVQTI ISTHNPSIIN
KLKLSNVLAF TGEKAISLSD TPTKLVDYLR KRPNFDILKL LFANKVILVE GPTEEMLIST
YLSKQPALND IDIIPIGQRG YATFLDIWLA LNKDNQNKKI GVVRDYDNSD AAKAKHDTYD
TAHANVTVRT TTNYTLEIDL VEAEDNLALL NDLFEMEGDL DAVSKHMING KTARMLDVCD
AMVDEENPLD IKLPAHIAEV IEAVS
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