Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2319 |
Symbol | |
ID | 5136112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2474537 |
End bp | 2475127 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533774 |
Product | hypothetical protein |
Protein accession | YP_001218234 |
Protein GI | 147675080 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATCGT CTCGTCTGCT ATGGCTACTC ATTAGTATGC TTTGGGTACC TCAGCTCGCC GCACAAAACG TCTACACTTG GGTCGATGAA AAAGGGGTCC TGCACTTTAG TGACACGCCA CAAAGTGACA AAGCAAAATC CATCCAGTTA CCGGATTATG AAGCACAAGC CCCTGCGCCA AGTTTCGACT CAACGGAGCC GGTCACAACA GAAACGGAGG ATGAAACAGG GCTTAGCAAT GTTACCGCCT CTGAAACAGA GCTAACCGAT TCGACAGCAT CTCCCGCACC TCAAACTCTG GAGCCGCTAA AAATCAGTTT AATCTCACCT AAGCATGACG ATGCGGTACG CAATAATAGC GGCAATCTCT TCATTCGCTC TGAGCTCAAT CGAAAACTTT CAATCGGTGA GCAATTGCAA TTGATGATGG ATGGCCGCCC GTATGGTGCC CCCACCACCC AATCAGTTTG GGAATTAAAA AATGTCGATC GCGGCACTCA CACCTTTACC ATTCAAGCGA TTGAAAGCGG CAAGATTATT GCATCCTCCT CGATTATCAC GGTGCATTTG CATCGAGCTA CAGTGAAATA A
|
Protein sequence | MSSSRLLWLL ISMLWVPQLA AQNVYTWVDE KGVLHFSDTP QSDKAKSIQL PDYEAQAPAP SFDSTEPVTT ETEDETGLSN VTASETELTD STASPAPQTL EPLKISLISP KHDDAVRNNS GNLFIRSELN RKLSIGEQLQ LMMDGRPYGA PTTQSVWELK NVDRGTHTFT IQAIESGKII ASSSIITVHL HRATVK
|
| |