| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2292 |
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| Symbol | |
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| ID | 5136052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2447649 |
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| End bp | 2448509 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640533747 |
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| Product | ComF family protein |
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| Protein accession | YP_001218207 |
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| Protein GI | 147675590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGC CGTGTACCAA TACCAGATCT TGCCCTTGTC CACTGACTTG CCAATACAAC
GCCATGGTCA CAGTTTCTCC GTCTATTTCC ATCTTCATCC ACTCTGCCAA TTGGCAAGAT
GAAGCACATT ACCCCGATTC TTGGCTCGCT ATGTTAACCC ATTGGCTCAG AAAAACTACC
GCACCACTGC TGACTCCGGA ATGTCATCTC TGTCGACTGG CGCTAGATAC AAATTCGCCG
TTTGGCGTCT GCTCTGCCTG CCAAGCTTGG CTTGAGCACG GTTATCGCTG CGCACGCTGC
GGTTTACCGA CTCTTACCCC AGTTGATCAG TGCGGGCAGT GTTTGGGTCA GCCTCCGCCG
TGGCGAAAAC TGATGTGTGT CGGCGATTAC CGCTTTCCAC TTAGTGATGC GGTGCATCAA
CTCAAATACC AACGCCAGTT TTGGCAAGCG CCGCGCTTGG CTAAGCTACT CGCCACCCAG
ATTAACGAGC CAGCCCCGTT GCTGTGCAGC GTGCCACTGC ATTGGCGGCG ACGCTGGCAA
CGCGGCTTTA ATCAAAGCGA TCTGCTGGCG CGCGAGTTAG CCAATATGCT GAACGTTGAA
TATGACCACC AACTCTTTGC ACGCCGCCGA GCGACACCGC ATCAACAAGG ACTCAGCAAG
GCGCAGCGAA TCCACAACCT ACGCGATGCG TTTGTGCTGA ATCATCCGCC AAACCAACCA
CATGTTGCGA TTGTGGACGA TGTGGTGACC ACAGGCAGTA CGATCCGACA TTTATGCGAT
TTACTGCTTG ATGTCGGTGT GCAAAGCATT GATATTTACT GCATATGCCG CACTCCCGAG
CCGAAAGATA GCCACGGTTG A
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| Protein sequence | MPQPCTNTRS CPCPLTCQYN AMVTVSPSIS IFIHSANWQD EAHYPDSWLA MLTHWLRKTT
APLLTPECHL CRLALDTNSP FGVCSACQAW LEHGYRCARC GLPTLTPVDQ CGQCLGQPPP
WRKLMCVGDY RFPLSDAVHQ LKYQRQFWQA PRLAKLLATQ INEPAPLLCS VPLHWRRRWQ
RGFNQSDLLA RELANMLNVE YDHQLFARRR ATPHQQGLSK AQRIHNLRDA FVLNHPPNQP
HVAIVDDVVT TGSTIRHLCD LLLDVGVQSI DIYCICRTPE PKDSHG
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