Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2284 |
Symbol | |
ID | 5135208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2439507 |
End bp | 2440907 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533740 |
Product | xanthine/uracil permease family protein |
Protein accession | YP_001218200 |
Protein GI | 147673726 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAC CGACTTCACG TAAGGCAGAT CTGGTCTATC AACTCAATGA TCGTCCCCCT TTGCCTCAAA CTCTCTTCGC AGCCTTGCAA CATCTGCTGG CGATGTTTGT CGCCGTGATC ACCCCATCGC TGATCATTTG CCAATCCCTT GGTGTACCTG CCGATCAAAC CAATACCATT ATCAGCATGT CACTGTTTGC TTCGGGTTTG TCATCCTTCA TTCAAATCCG TACCTTTGGC CCAATTGGCT CAGGTTTGCT TTCCATTCAA GGCACCAGCT TTAACTTTTT AGGCCCCATT ATTGGTGCTG GACTTGCGCT CAAAGCAGGC GGTGCAGATA TAGAGACCAT GATGGCCGCG ATTTTTGGTA CGATTTTGGT CGCCTCAAGC GCTGAAATTT TACTGTCCCG CGTGCTGCAA TTTGCCCAGC GCGTGATTAC GCCGTTAGTC TCTGGGATTG TGGTGACCTT GATTGGCCTA ACGCTGGTAC AAGTCGGATT GATTTCGATG GGTGGCGGTT ATGCGGCTAT GGCTGACGGC AGCTTTGGTA GCCTCGATAA GCTTGCGCTA GCTGGCACCG TATTGGCGAT CATTGTGCTG CTGAACCGAG CGCACAACCC TTACGTGCGA GTGGCTTCGA TTGTGATTGC GATGCTGGTA GGTTATGTAA TGGCGTACCT GATGGGCATG GTCAATACCG ATAACTTGGC ACAGACTCAA CTCATCGCAC TGCCTATCCC GATGCAATAT GGCTTAGGGT TTGACTGGTC GCTGTTTATT CCTCTGGTGC TGATTTTCCT CATCACGGCA CTAGAAGCGA TTGGTGATAT CACGGCGACC TCCGAAGTCT CTGGTGAGCC CGTGAAAGGC CCTGTGTATA TGAAGCGCAT CAAAGGCGGC GTATTGGCCG ATGGCCTCAA CTCTGCCCTT GCCGCGGTAT TTAACAGCTT TCCAAACTCC ACCTTTAGCC AAAACAACGG CGTGATCCTA TTAACCGGCG TTGCCAGCCG TTATGTGGGT TACTTTATCG CGGGCATGTT GGTGCTACTT GGCCTCTTCC CCGGCGTTGC AAGCTTTGTA CAGTTGATTC CTGAACCTGT GCTTGGCGGC GCAACGATTG TGATGTTTGG TACGATTGCT GCGGCAGGCG TGCGCATTAT CTCTCGCGTC GATTTGGATC GCCGTGCGAT TCTGATCATG GCGCTCTCCT TCTCAATGGG TTTGGGAATT GCGCAAAAGC CAGAGATTCT GCAGTTTATG CCGGAATTTA TTAAGAATCT GTTCTCTTCA GGTGTAGCCG CAGGTGGTAT TACCGCCATC GTGCTTAACC TGCTGCTGCC AGAAGTACGC CGAGATGAAA ACGCCGCTTC GGTTACCGAA ACGGCGCAAG AGTCAAACTA A
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Protein sequence | MIQPTSRKAD LVYQLNDRPP LPQTLFAALQ HLLAMFVAVI TPSLIICQSL GVPADQTNTI ISMSLFASGL SSFIQIRTFG PIGSGLLSIQ GTSFNFLGPI IGAGLALKAG GADIETMMAA IFGTILVASS AEILLSRVLQ FAQRVITPLV SGIVVTLIGL TLVQVGLISM GGGYAAMADG SFGSLDKLAL AGTVLAIIVL LNRAHNPYVR VASIVIAMLV GYVMAYLMGM VNTDNLAQTQ LIALPIPMQY GLGFDWSLFI PLVLIFLITA LEAIGDITAT SEVSGEPVKG PVYMKRIKGG VLADGLNSAL AAVFNSFPNS TFSQNNGVIL LTGVASRYVG YFIAGMLVLL GLFPGVASFV QLIPEPVLGG ATIVMFGTIA AAGVRIISRV DLDRRAILIM ALSFSMGLGI AQKPEILQFM PEFIKNLFSS GVAAGGITAI VLNLLLPEVR RDENAASVTE TAQESN
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