Gene VC0395_A2280 details

Gene Information

• Locus tag: VC0395_A2280
• Symbol: gmk
• ID: 5136955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2433747
• End bp: 2434436
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640533736
• Product: guanylate kinase
• Protein accession: YP_001218196
• Protein GI: 147674080
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTATCTT TAAATCATTG CCGGTTAAGG CAAAGACACA ATCCCAACCT AAGTGGAACC 
GAATCGATGG GCAAAGGTAC TCTTTATATC GTTTCTGCAC CCAGTGGCGC AGGCAAATCA 
AGCTTAATTG CCGCCCTATT GGAGCAAAAC CCAACCTATG CAATGAAAGT CTCGGTCTCA 
CATACCACGC GTGGTATGCG CCCCGGCGAA CAAGATGGCG TTCATTACCA TTTTGTCGAG 
AAAGAACATT TCATTGAGCT TATCGGCAAA GGGGAATTCC TCGAATACGC AGAAGTGTTT 
GGCAACTATT ACGGCACTTC TCGGGTGTGG ATTGAAAACA CACTCAACAA AGGGATTGAT 
GTGTTTCTCG ATATCGACTG GCAAGGTGCG CGTCAAATCC GTAGCCAAAT GCCAGAAGCG 
AAAAGCATCT TTATCCTGCC GCCTTCGAAA GAAGAGCTGG AACGCCGCTT AAACACGCGC 
GGCCAAGACA GCGATGCGGT GATCGCTAAA CGCATGGGTG AGGCTAAATC TGAGATTTCG 
CATTACAGCG AATATGATTA CGTCATCATT AATGATGATT TTGATGTCGC GTTAATGGAT 
TTCAAAGCCA TCATTCGTGC AGAAAGATTG AAGCAAGACA AGCAAGCTGC TAAATATAGC 
GCTATGTTGT CTGCTCTGTT GGCTGAATAA 

 

Protein sequence

MLSLNHCRLR QRHNPNLSGT ESMGKGTLYI VSAPSGAGKS SLIAALLEQN PTYAMKVSVS 
HTTRGMRPGE QDGVHYHFVE KEHFIELIGK GEFLEYAEVF GNYYGTSRVW IENTLNKGID 
VFLDIDWQGA RQIRSQMPEA KSIFILPPSK EELERRLNTR GQDSDAVIAK RMGEAKSEIS 
HYSEYDYVII NDDFDVALMD FKAIIRAERL KQDKQAAKYS AMLSALLAE