| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2270 |
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| Symbol | aspA |
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| ID | 5137600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2418831 |
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| End bp | 2420282 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533726 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_001218186 |
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| Protein GI | 147675095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.935521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACCC TATCTGAAGC GCCTAAAACA GCGACTCCGG CTACCCGCGT TGAAGAAGAT
CTGTTAGGTC AACGTCACGT TCCTGCTGAT GCTTACTACG GTATTCATAC CCTTCGTGCT
GTCGAAAACT TCAACATCTC TAACGTTACG ATCTCTGACG TGCCTGAATT TGTACGCGGC
ATGATCATGA CCAAAAAAGC GGCCACTCTG GCAAACAAAG AGCTGGGCGT GATTCCTAAA
GATGTGGCGA ACTACATCCT TCAAGCGTGT GATTTGATTC TTGAAACAGG TAAGTGCATG
GATCAATTCC CGTCAGATGT ATTCCAAGGT GGTGCGGGCA CGTCAGTGAA CATGAACACC
AACGAAGTGA TTGCTAACGT TGCACTCGAG CTGATGGGCA AACAAAAAGG TCAATACGAG
TTCATCAACC CCAATGACCA CGTAAACAAG AGCCAATCAA CCAACTGTGC ATACCCAACG
GGTTTCCGCA TCGCGGTTTA CAACAGCATC CTGAAAGTGA TTGATGCGAT TGAATACCTA
AAAGGCTCAT TCGAACTTAA AGCGGCTGAG TACAAAAACA TCCTGAAAAT GGGTCGTACT
CAGTTGCAAG ACGCTGTACC TATGACCGTA GGTCAAGAAT TCCACGCATG GGCTGTGACG
CTGAATGAAG AGATCCGCGC GCTGCAATAC ACTTCAAAAC TGCTTTTGGA AGTGAACTTG
GGCGCAACCG CGATCGGTAC TGGCCTGAAC GCCGCTCCGG GTTACCAAGA GCTGGCCGTG
AAATATCTGG CGCAAGTGAC AGGTTTAGAA ACCGTTCCAG CAGAAGATCT GATTGAAGCC
ACCTCTGACT GTGGTGCTTA CGTGATGACT CACGGCGCGT TGAAACGTCT AGCGATGAAG
CTCTCTAAGA TCTGTAACGA TCTACGTCTG CTCTCTTCTG GTCCACGTGC AGGTCTGAAT
GAAATCAACT TGCCTGAACT GCAAGCGGGT TCGTCCATCA TGCCAGCGAA AGTAAACCCA
GTAATCCCAG AAGTGGTGAA CCAAGTTTGC TTTAAAGTAT TCGGTAACGA CAACACCATT
ACATTCGCCG CAGAAGCGGG TCAACTGCAG TTGAACGTCA TGGAGCCTGT GATTGCTCAA
GCGATGTTTG AGTCTATCTC TCTGCTGACT AACGCCTGTG TCAACCTACG CGACAAGTGC
ATTGATGGCA TCACAGTCAA CAAAGAAATC TGTGAAAACT TCGTGTTTAA CTCTATCGGT
ATCGTGACTT ACTTAAACCC ATACATTGGC CACCATGAGG GTGACATTGT CGGTAAGATC
TGTGCCGAAA CCGGTAAGAG CGTACGCGAA GTGGTACTTG AGCGCGGCTT GCTAACTGAA
GAGCAGCTCG ATGACATCTT CTCGGTTGAG AACCTGATGC ATCCTCAGTA CAAAGCAAAA
CGTTACGAAT AA
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| Protein sequence | MATLSEAPKT ATPATRVEED LLGQRHVPAD AYYGIHTLRA VENFNISNVT ISDVPEFVRG
MIMTKKAATL ANKELGVIPK DVANYILQAC DLILETGKCM DQFPSDVFQG GAGTSVNMNT
NEVIANVALE LMGKQKGQYE FINPNDHVNK SQSTNCAYPT GFRIAVYNSI LKVIDAIEYL
KGSFELKAAE YKNILKMGRT QLQDAVPMTV GQEFHAWAVT LNEEIRALQY TSKLLLEVNL
GATAIGTGLN AAPGYQELAV KYLAQVTGLE TVPAEDLIEA TSDCGAYVMT HGALKRLAMK
LSKICNDLRL LSSGPRAGLN EINLPELQAG SSIMPAKVNP VIPEVVNQVC FKVFGNDNTI
TFAAEAGQLQ LNVMEPVIAQ AMFESISLLT NACVNLRDKC IDGITVNKEI CENFVFNSIG
IVTYLNPYIG HHEGDIVGKI CAETGKSVRE VVLERGLLTE EQLDDIFSVE NLMHPQYKAK
RYE
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