Gene VC0395_A2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2265 
SymbolcpxA 
ID5135839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2414364 
End bp2415758 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content51% 
IMG OID640533721 
Producttwo-component sensor protein 
Protein accessionYP_001218181 
Protein GI147673577 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000076955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTAC CGTTACCGAA ATTGAATAAC CTGTATGGGC GCATCTTTGC GATTTTCTGG 
TTTACCATGC TGTTGGTACT GTTCGCGGTA TTGACCCTAC CTCATCTTGA CCCGCGTAAA
TCGCGTGACT TATCACCCGA AACGCATCAA CGTTTGCTCG AGAGCAGAGA TCGCTTTGAA
CAGCAATTTC GCAACCAAAG CGACTTAAGA GCCATTCTGT TTCAGCTCGA AGGGCCAGAC
AGTCAGCACC GTAAACACGA TGGTCAGCCG CGTTTTTTTA TCACCGATTT GGAAAGCAAC
ATTATCACCA ACTCAAAGCA GACCGATTTT CGTTTTAAAG CGATGCAAAA CTTCTGCTCC
AGTATTGAAT CGGTTCAAAA ACCGCAGCAG CGCCTGTATG GCCGTTATAT GTTGGCAGGC
CCAGTGCCCA TTACGTTAGC CAAACAAGAT CTGCTGTTGT ATGTCGGTAT GCGCTGGGAT
GAACCACCGC CGTTTTTGCT GCGTCTGTTT GATAAACCCT TCCAACTCTT GTTGGCGATC
ATGCTGGTGA GCACCCCGCT GCTACTGTGG CTGGCGTGGG CCTTGAGTAA ACCGGCGCAA
AATCTGGCTC AAGCCGCGCA GCGTGTCGCG CGGGGCGAAT TTGTGCATGA CCCGAAATTA
GAACGCGGCA CAGCGGAGTT TCAACAGGCG GGACGCAGCT TTAACCAGAT GGTGGATGCG
GTCAATCAGA TGGTTTCTGG GCAGCAAAGA CTGCTTTCTG ACATCTCCCA CGAATTGCGT
TCCCCCTTAA CTCGGCTACG CATGGCCAAC GCGCTGGCAA TGCGTAAACT CGGCAGTAGC
AGTGAATTAG AACGGATCGA TACCGAAGCA CAACGTTTAG AGCAGATGAT TGGGGATTTA
CTGGCGCTCT CACGCATGCA AATCAATAGC CATTTAATGC GCGAAGTGCA GCCACTGAGT
AGTTTATGGG AAGAGTTGCT CAAAGATGCG CAATTTGAAG CTGAACAGAT GCACAAAATG
CTGACTTTTG ACGCGATCCC AGAGCGAACC ATCAACGGCA CGCCCAAATT ACTGATGAGT
GCATTGGAAA ACGTGGTGCG TAACGCGATC CACTACGGGC AACAGCAGAT CCACGTAGCC
TTTACCATTC AAGACCAGCA ACTCATCGTG AGCGTCGATG ATGATGGCGA AGGTGTACCC
GAAGAGGAGT TGGCGGATAT TTTCCGCCCG TTCTATCGCG TCTCGACAGC GCGGGATCGA
CACAGCGGTG GCACAGGGCT TGGTTTAGCC ATCACCGAAA ATGCCATTCG CCAACACAGT
GGCACTATCA GCGCAAACCG CAGTCACTTA GGAGGCTTAC AAGTTCGCTT TACTTTACCT
CTGGCGAGCG CTTAA
 
Protein sequence
MRLPLPKLNN LYGRIFAIFW FTMLLVLFAV LTLPHLDPRK SRDLSPETHQ RLLESRDRFE 
QQFRNQSDLR AILFQLEGPD SQHRKHDGQP RFFITDLESN IITNSKQTDF RFKAMQNFCS
SIESVQKPQQ RLYGRYMLAG PVPITLAKQD LLLYVGMRWD EPPPFLLRLF DKPFQLLLAI
MLVSTPLLLW LAWALSKPAQ NLAQAAQRVA RGEFVHDPKL ERGTAEFQQA GRSFNQMVDA
VNQMVSGQQR LLSDISHELR SPLTRLRMAN ALAMRKLGSS SELERIDTEA QRLEQMIGDL
LALSRMQINS HLMREVQPLS SLWEELLKDA QFEAEQMHKM LTFDAIPERT INGTPKLLMS
ALENVVRNAI HYGQQQIHVA FTIQDQQLIV SVDDDGEGVP EEELADIFRP FYRVSTARDR
HSGGTGLGLA ITENAIRQHS GTISANRSHL GGLQVRFTLP LASA