| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2252 |
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| Symbol | rpmE |
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| ID | 5135489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2401683 |
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| End bp | 2401901 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533708 |
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| Product | 50S ribosomal protein L31 |
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| Protein accession | YP_001218168 |
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| Protein GI | 147674481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.200856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCTG GTATCCACCC AGAATACAAA GCAGTAAACG CAACTTGTTC TTGCGGCAAC
TCTTTCGTTT TCAACTCTAC TCTAGGTAAA GACACAATGC ACCTAGACGT ATGTGACAAG
TGCCACCCAT TCTACTCTGG TAAGCAACGT ATCGTTGACA CCGGTGGTCG TGTTGAGCGC
TTCAACAAGC GTTTCGGCGC ACTGTCTGCG AAGAAGTAA
|
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| Protein sequence | MKAGIHPEYK AVNATCSCGN SFVFNSTLGK DTMHLDVCDK CHPFYSGKQR IVDTGGRVER
FNKRFGALSA KK
|
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