| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2243 |
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| Symbol | tpiA |
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| ID | 5137133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2391102 |
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| End bp | 2391899 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533699 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001218159 |
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| Protein GI | 147673165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAGAT ATGGAGATAT TCCTATGCGT CGTCCTGTTG TGATGGGTAA CTGGAAACTG
AATGGCAGCA AAGCTATGGT CACTGACCTG CTAAACGGTT TGAATGCAGA ACTTGAAGGT
GTTGAAGGTG TTGATGTTGT CGTTGCGCCA CCAGCAATGT ATTTGGATCT GGCTGAGCGC
CTGATCAAAG AAGGCGGCAA CAAGCTGATC CTGGGTGCAC AAAACACCGA TACTCACAAC
AGTGGTGCGT ACACAGGTGA TATGTCTCCT GCGATGCTGA AAGATTTCGG TGCTTCGCAC
ATCATCATCG GTCACTCTGA GCGTCGTGAT TACCACAAAG AATCAGATGA GTTCGTCGCT
AAGAAATTTG CGTTCCTGAA AGAAAACGGC CTAACGCCAG TCTTCTGTAT CGGTGAAACT
GAAGCGCAAA ACGAAGCGGG CGAAACAGAA GCGGTATGTG CTCGCCAAAT CAACGCAGTG
ATCGATGCTT ACGGCGTTGA AGCACTGAAC GGCGCGATCA TCGCTTACGA ACCAATCTGG
GCAATCGGTA CGGGTAAAGC CGCGACAGCA GATGATGCAC AGCGTATCCA CGCGTCAATC
CGTGCACTGA TCGCTGCGAA AGATGCTGCA GTGGCTGAGC AAGTGATCAT CCAGTACGGC
GGTTCCGTAA AACCAGAAAA CGCAGCGTCT TACTTTGCAC AACCAGACAT CGATGGTGCG
CTGGTTGGCG GTGCATCACT GGATGCGAAA GGCTTTGCCG CGATCGCCAA AGCCGCAGCA
GAAGCGAAAA AAGCGTAA
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| Protein sequence | MIRYGDIPMR RPVVMGNWKL NGSKAMVTDL LNGLNAELEG VEGVDVVVAP PAMYLDLAER
LIKEGGNKLI LGAQNTDTHN SGAYTGDMSP AMLKDFGASH IIIGHSERRD YHKESDEFVA
KKFAFLKENG LTPVFCIGET EAQNEAGETE AVCARQINAV IDAYGVEALN GAIIAYEPIW
AIGTGKAATA DDAQRIHASI RALIAAKDAA VAEQVIIQYG GSVKPENAAS YFAQPDIDGA
LVGGASLDAK GFAAIAKAAA EAKKA
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