Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2239 |
Symbol | |
ID | 5137674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2388830 |
End bp | 2389447 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533695 |
Product | hypothetical protein |
Protein accession | YP_001218155 |
Protein GI | 147674315 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGG TTGACCGCAT TCTTCACACG ATCAAACGTG AAGGCACAGT AACCGCCAAA CAGTTGGCTG AAGACCTAGG TATCACGACC ATGGGCGCTC GTCAGCATTT ACAAAGTCTG GAAGAAGAAG GTGTGCTGGC CTTTCATGAT GTGAAAGTCA AGGTCGGTCG TCCGACTCGC CATTGGTCTT TAACCGCGAA AGGACACAAT CAGTTTGCCG ATCGTCATGG TGAGCTGACC ATTCAAGTGA TTGATGCGGT CGAGCATATT TTTGGTAAAG AAGGACTCGC CAAGGTGGCG GCGGAACGGG AAGCCCAAAC CTTTGCTGCC TATCACAACG CCTTAGTGGA GTGCCACTCT CTACAAGAAA AACTCGAAGC TTTGGTTACC CTGCGCGAAC AAGAAGGCTA TATGGCCGAG TTAGAGTCGA CGGCCGACGG CTTTATTTTG ATTGAAAACC ACTGCCCGAT TTGCAAAGCA GCCACCCGCT GTCCCAGCCT GTGCCAATCT GAGTTGAATG TTTTTCGCCG TTTATTGGGC GAAGAATGCC ATATCGAACG CCGCGAACAC ATTGTCGCCG GAGAGCGTCG CTGCACTTAC TTTATTGCCG CGCGATAA
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Protein sequence | MKTVDRILHT IKREGTVTAK QLAEDLGITT MGARQHLQSL EEEGVLAFHD VKVKVGRPTR HWSLTAKGHN QFADRHGELT IQVIDAVEHI FGKEGLAKVA AEREAQTFAA YHNALVECHS LQEKLEALVT LREQEGYMAE LESTADGFIL IENHCPICKA ATRCPSLCQS ELNVFRRLLG EECHIERREH IVAGERRCTY FIAAR
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