| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2213 |
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| Symbol | |
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| ID | 5136894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2362162 |
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| End bp | 2363055 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533669 |
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| Product | DNA-binding transcriptional regulator OxyR |
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| Protein accession | YP_001218129 |
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| Protein GI | 147674528 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC GTGATTTTGA ATACTTGGTC GCATTAGCTG ACCACAAGCA TTTCCGTAAA
GCGGCAGAAG CGTGCTTTGT CAGCCAACCC ACCTTGAGTG GCCAGATCCG TAAGTTGGAA
GATGAAATTG GAACGACTTT GCTTGAGCGC AGCAGTCGTC GAGTTCTGTT TACCGAAGCG
GGGCTACAAC TGGTTGATCA GGCAAAGAAA ATCCTTTCGG AAGTGAAAAC GTTTAAAGAT
ATGGCTAACC AGCAAACCGG AGCCATGACT GGGCCGTTGC ACATCGGCTT TATTCCGACC
TTAGGGCCGT ATTTACTGCC GAAGATCATT CCTACTTTGA AAGAACGTTT CCCTGAATTG
GAGCTGTATC TGCATGAAGC GCAGACTAAC CAGTTAGTGC GTCAGCTCGA AGAGGGCAAA
CTGGATTGCT TGGTGCTCGC TTCGGTGGAA GAGACGGCAC CTTTTAAAGA AATTGAGCTG
TATAACGAAG TGTTGAGCAT TGCAGTGCCT TGCGATCATG CTTGGGCGGC GCGTGACGAA
GTGGACATGC TGGAGCTGAA AGGTAAGACC GTATTGGCTT TAGGAGATGG GCATTGCCTG
CGCGATCAAG CGTTAGGTTT TTGCTTTGCT GCGGGAGCGA AAGATGATGA ACGCTTTAAA
GCCACCAGTT TAGAAACGTT GCGCAATATG GTGGCTGCAG GCGCGGGGAT CACCTTATTG
CCTGAGCTAG CCTTACCTGA AGATAAAACC AAAGATGGGG TTTGTTACCT GCGGGCGGTT
AACCCGATTC CATCGCGTCG ACTCGTCTTG GCTTATCGAC CAGGCTCGCC TTTACGCCAG
CGGTTTGAGC AGTTGGCAGA AGTGATTAAA CATCGCTTAC AGCAAAGCGA GTAA
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| Protein sequence | MNIRDFEYLV ALADHKHFRK AAEACFVSQP TLSGQIRKLE DEIGTTLLER SSRRVLFTEA
GLQLVDQAKK ILSEVKTFKD MANQQTGAMT GPLHIGFIPT LGPYLLPKII PTLKERFPEL
ELYLHEAQTN QLVRQLEEGK LDCLVLASVE ETAPFKEIEL YNEVLSIAVP CDHAWAARDE
VDMLELKGKT VLALGDGHCL RDQALGFCFA AGAKDDERFK ATSLETLRNM VAAGAGITLL
PELALPEDKT KDGVCYLRAV NPIPSRRLVL AYRPGSPLRQ RFEQLAEVIK HRLQQSE
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