Gene VC0395_A2205 details

Gene Information

• Locus tag: VC0395_A2205
• Symbol: aroB
• ID: 5135068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 2353222
• End bp: 2354322
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640533661
• Product: 3-dehydroquinate synthase
• Protein accession: YP_001218121
• Protein GI: 147673423
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000150156
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGTGCA AAACCATGGA GCGGATTACG GTCAACTTAG GTGAACGTAG CTACCCAATC 
TCAATCGGTG CCGGATTGTT TGCCAATCCG GCTCTTCTTT CCCTCTCTGC TAAGCAGAAG 
GTGGTGATAG TCACCAACCA CACTGTCGCT CCGCTGTATG CGCCTGCGAT CATTTCATTA 
CTTGATCACA TCGGTTGCCA GCATGCTTTG CTGGAACTGC CCGATGGCGA ACAGTACAAA 
ACTCTCGAAA CCTTCAACAC TGTGATGAGC TTTTTGCTTG AGCATAACTA CAGCCGTGAT 
GTGGTTGTCA TTGCTTTAGG TGGGGGAGTG ATTGGTGATC TGGTCGGTTT CGCGGCGGCT 
TGTTATCAGC GTGGCGTTGA TTTCATTCAA ATACCGACCA CACTGCTGTC GCAGGTGGAT 
TCTTCGGTCG GTGGGAAAAC CGCGGTCAAT CATCCGCTCG GTAAAAACAT GATTGGTGCT 
TTTTATCAAC CCAAAGCGGT AGTGATTGAT ACGGACTGTT TGACTACACT GCCCGCCCGT 
GAATTTGCCG CTGGCATGGC GGAAGTCATC AAGTACGGCA TCATTTACGA CTCAGCCTTC 
TTCGACTGGC TAGAAGCACA GATGGAGGCC TTGTACGCAT TGGACGAACA AGCGCTCACT 
TACGCAATTG CGCGCTGCTG CCAAATCAAA GCCGAGGTGG TCGCGCAAGA TGAGAAAGAG 
TCGGGCATTC GTGCGTTACT CAATCTTGGT CACACCTTCG GCCATGCAAT TGAAGCACAC 
ATGGGCTATG GCAATTGGCT GCACGGTGAA GCCGTATCTG CGGGTACAGT AATGGCGGCG 
AAAACGGCTC AATTACAAGG CCTTATCGAT GCATCTCAAT TTGAACGTAT CCTAGCTATA 
CTGAAAAAAG CGCATTTGCC TGTGCGAACC CCAGAGAACA TGACCTTTGC CGATTTCATG 
CAGCACATGA TGCGCGATAA AAAAGTGTTG GCAGGGGAAC TGCGTTTGGT GTTACCGACC 
AGTATCGGCA CGTCAGCGGT CGTAAAAGGG GTACCTGAAG CCGTGATTGC CCAAGCGATA 
GAGTATTGTC GCACGGTGTA A 

 

Protein sequence

MECKTMERIT VNLGERSYPI SIGAGLFANP ALLSLSAKQK VVIVTNHTVA PLYAPAIISL 
LDHIGCQHAL LELPDGEQYK TLETFNTVMS FLLEHNYSRD VVVIALGGGV IGDLVGFAAA 
CYQRGVDFIQ IPTTLLSQVD SSVGGKTAVN HPLGKNMIGA FYQPKAVVID TDCLTTLPAR 
EFAAGMAEVI KYGIIYDSAF FDWLEAQMEA LYALDEQALT YAIARCCQIK AEVVAQDEKE 
SGIRALLNLG HTFGHAIEAH MGYGNWLHGE AVSAGTVMAA KTAQLQGLID ASQFERILAI 
LKKAHLPVRT PENMTFADFM QHMMRDKKVL AGELRLVLPT SIGTSAVVKG VPEAVIAQAI 
EYCRTV