| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2202 |
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| Symbol | rpe |
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| ID | 5135077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2349988 |
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| End bp | 2350698 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533658 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001218118 |
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| Protein GI | 147674230 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.780277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAGCT TGCATTCAAT TCCTAACGAG GTCGGTATGA AAGATTTTCT CATTGCACCA
TCCATTCTCT CCGCTGATTT TGCCCGTCTG GGCGAAGATG TTGCCAAAGT GCTCGCCGCA
GGAGCGGATG TGGTGCATTT CGATGTGATG GACAATCACT ACGTACCGAA CCTGACGTTT
GGCGCACCGA TTTGTAAAGC CCTGCGCGAT TACGGCATTA CGGCACCGAT TGATGTGCAT
TTGATGGTGA AACCGGTGGA TCGCATCATT CCGGACTTTG CCAAAGCAGG CGCCTCCATG
ATCACTTTCC ACGTTGAAGC CTCAGAGCAC GTTGACCGCA CTTTGCAGCT CATCAAAGAG
TGCGGCTGTC AGGCGGGCGT GGTACTGAAC CCAGCGACAC CTCTGCACCA TCTCGATTAC
ATCATGGATA AAGTCGATTT GATTTTGCTG ATGTCGGTGA ACCCAGGCTT TGGCGGACAA
TCTTTTATTC CGCATACCTT AGATAAACTG CGCGCGGTGC GTGAACGTAT CAAGCAAAGC
GGGCGTCAAA TTCGTTTGGA AATTGATGGT GGCGTGAAAG TGGAGAATAT CCGGGAAATC
GCGGAAGCGG GTGCCGATAT GTTTGTGGCA GGCTCGGCGA TTTTTGGTCA GCCTGATTAC
CAAGCGGTGA TTGAGCAGAT GCGTGCTGAA CTGGCGAAAG CCAAAATTTA A
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| Protein sequence | MFSLHSIPNE VGMKDFLIAP SILSADFARL GEDVAKVLAA GADVVHFDVM DNHYVPNLTF
GAPICKALRD YGITAPIDVH LMVKPVDRII PDFAKAGASM ITFHVEASEH VDRTLQLIKE
CGCQAGVVLN PATPLHHLDY IMDKVDLILL MSVNPGFGGQ SFIPHTLDKL RAVRERIKQS
GRQIRLEIDG GVKVENIREI AEAGADMFVA GSAIFGQPDY QAVIEQMRAE LAKAKI
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