| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2186 |
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| Symbol | |
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| ID | 5136467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2331196 |
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| End bp | 2333112 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533642 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001218102 |
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| Protein GI | 147674436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.151795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCT TTTCTGAGAT TCAGCTACTG CGTGGCGGCA AACCACTCCT TGAGCAAGCT
TCAGCCACCA TTCATCCCGG CGACAAAGTC GGCTTAGTGG GCAAAAACGG CTGCGGCAAA
TCCACTCTCT TTGCACTGCT GAAAGATGAA CTCACCATTG ATGCGGGCTC CTTCAGTAAA
CCAGCGCACT GGGAGCTGGC TTGGGTAGCA CAGGAAACCC CGGCGCTGGA TCGCACAGCA
TTGGAATACG TCATCGATGG CGATCGCGAA TACCGCGAAC TTGAACGCCA ATTGATGGAC
GCAGAAGCGG CCGACAACGG CACCAAAGTG GCCGATTTGC ATGGCAAAAT CGAGATGGTC
GGTGGTTACA GCATTCGCGC TCGCGCCTCA GAACTGCTTG ACGGTTTAGG CTTTACTCAA
GAGCAGATGA GCTGGAGCCT GACCCAATTT TCTGGTGGCT GGCGGATGCG TTTAAACCTC
GCGCAAGCGC TGATTTGCCG CTCAGATTTA CTGCTGCTCG ACGAACCGAC CAACCACTTG
GATTTGGATG CGGTGATGTG GCTAGAGCGT TGGCTGCAAA GCTACCCCGG CACGCTGATC
CTGATTTCCC ATGACCGCGA TTTCCTCGAC CCAATCGTCA ATCGCATTGT GCATATTGAA
AATCAGACGC TGAATGAATA CACGGGCAAC TACTCGTCGT TTGAAACTCA GCGCGCACAG
AAAATGCTTC AGCAACAAGC CATCTATCAA AAGCAACAAA AGCAGATGGC GCACATGCAA
AGCTATATTG ATCGCTTCCG CTATAAAGCG TCGAAAGCTC GCCAAGCCCA AAGCCGGATT
AAAGCGCTGG AGCGGATGGA AAAAGTGCTG CCCGCCCAGT TTGATAACCC GTTCAGCTTT
GAATTTCGTG AACCTGCCGC GCTGCCGAAC CCGATCCTGA TGATGGATCA GGTCGCAGCG
GGCTACGGCG ATAACCTCAT CCTCGAGAAG ATCCGCCTCA ATCTGGTGCC GGGCAGTCGC
ATCGGTCTGC TTGGTCGTAA CGGCGCAGGT AAATCCACCT TGATCAAACT GCTCTCGGGT
GAGCTCAAAC CGCAATCGGG TGACTGCACA TACTCGCAAG GGGTGAAAAT TGGTTACTTT
GCGCAGCATC AGTTGGAAAC ACTGCATCCA GAAGAAACGC CGCTGCAACA CATGATGCAA
ATCGCGCCAG ACAAAAATGA GCTCGAGCTG CGTAACTACT TAGGCAGCTT TGGTTTCCAT
GGTGAGAAAG CACTCGAAAA AGTCGCGCCC TTCTCGGGTG GTGAAAAGGC CCGTTTAGTG
CTGGCACTGA TTGTGTGGCA AAAGCCCAAC TTACTGCTGC TTGACGAACC CACCAACCAT
TTGGATTTGG ATATGCGTCA GGCGCTAACC CTTGCGCTAC AAAGCTATGA AGGCGCAATG
GTCATTGTCA GCCATGATCG CTACTTGCTG CGTGCCACCA CCGATGATCT CTATTTAGTG
CATGATCACC AAGTCGGCCC GTTTGATGGT GACTTGAATG ACTACTACAA ATGGCTTACC
GATCAGCAAA AAGCCGAGCG TAAAGAAACC CAACCGACCA ATACTGCGAA TAGCGCGAAC
AGTGCCGCGG CGAAAAAAGA GCAAAAGCGC CGTGAAGCCG ATTTTCGTAA GCTCACTGCG
CCAATTCGCA AAAAGCTGAC ACAGTTAGAA GAGAAACTCG ATAAGTTGAA CCACGTTGTC
AGTGAGATGG AAGCACAATT GTCGGACACC TCACTGTACG AAGCACAGAA TAAAGCGACA
CTGACTGAGG TGTTGGCTAA ACAAGCCGCC GCCAAATCCG AGCTTGAGCA AGTCGAGCTA
GAATGGATGG CCGAACAAGA AACCTTGGAA GAGATGGAAC GGGAGTTCAA CGGATAA
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| Protein sequence | MITFSEIQLL RGGKPLLEQA SATIHPGDKV GLVGKNGCGK STLFALLKDE LTIDAGSFSK
PAHWELAWVA QETPALDRTA LEYVIDGDRE YRELERQLMD AEAADNGTKV ADLHGKIEMV
GGYSIRARAS ELLDGLGFTQ EQMSWSLTQF SGGWRMRLNL AQALICRSDL LLLDEPTNHL
DLDAVMWLER WLQSYPGTLI LISHDRDFLD PIVNRIVHIE NQTLNEYTGN YSSFETQRAQ
KMLQQQAIYQ KQQKQMAHMQ SYIDRFRYKA SKARQAQSRI KALERMEKVL PAQFDNPFSF
EFREPAALPN PILMMDQVAA GYGDNLILEK IRLNLVPGSR IGLLGRNGAG KSTLIKLLSG
ELKPQSGDCT YSQGVKIGYF AQHQLETLHP EETPLQHMMQ IAPDKNELEL RNYLGSFGFH
GEKALEKVAP FSGGEKARLV LALIVWQKPN LLLLDEPTNH LDLDMRQALT LALQSYEGAM
VIVSHDRYLL RATTDDLYLV HDHQVGPFDG DLNDYYKWLT DQQKAERKET QPTNTANSAN
SAAAKKEQKR READFRKLTA PIRKKLTQLE EKLDKLNHVV SEMEAQLSDT SLYEAQNKAT
LTEVLAKQAA AKSELEQVEL EWMAEQETLE EMEREFNG
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