| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2175 |
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| Symbol | rpsJ |
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| ID | 5136162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2318350 |
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| End bp | 2318661 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533631 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001218091 |
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| Protein GI | 147675533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000032436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AACGTATCCG TATCCGCCTG AAAGCTTTCG ATTACAAACT GATCGATGCT
TCTACAGCGG AAATCGTTGA AACAGCTAAG CGCACTGGCG CACAGGTTCG TGGTCCAATC
CCACTGCCAA CTCGTAAAGA GCGTTTCACT GTTCTTATCT CTCCACACGT TAACAAAGAT
GCTCGTGATC AGTACGAAAT CCGTACTCAC AAACGTCTAA TCGACATCGT TGAACCAACA
GACAAAACTG TTGATGCTCT GATGCGTCTA GACCTTGCTG CGGGCGTTGA CGTACAAATT
AGCCTAGGTT AA
|
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| Protein sequence | MQNQRIRIRL KAFDYKLIDA STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD
ARDQYEIRTH KRLIDIVEPT DKTVDALMRL DLAAGVDVQI SLG
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