Gene VC0395_A2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2173 
SymbolrplD 
ID5136902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2317087 
End bp2317689 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content47% 
IMG OID640533629 
Product50S ribosomal protein L4 
Protein accessionYP_001218089 
Protein GI147673082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.74601e-10 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA TGGTTAAAGG TGCTAACGCA CTAACTGTTT CCGAAACTAC TTTCGGACGT 
GAGTTCAACG AAGCTCTTGT ACACCAAGTA GTTGTTGCTT ATGCAGCAGG TGCTCGTCAA
GGTACTCGTG CTCAAAAGAC ACGTTCAGAA GTTTCTGGCG GTGGCGCTAA GCCATGGCGT
CAAAAAGGTA CTGGCCGTGC ACGTGCTGGT ACAATCCGTA GCCCAATCTG GCGTACAGGT
GGTGTTACTT TTGCTGCGAA ACCACAAGAT CACAGCCAAA AAGTAAACAA GAAAATGTAC
CGTGGTGCTA TGAAGAGCAT TCTGTCTGAG CTAGTTCGTC AAGAGCGTTT GATCGTTGTT
GAAAACTTCT CAGTTGAAGC TCCAAAGACC AAAGCTCTGG TAGCTAAGCT AAAAGAACTT
GAGCTGAACG ATGTTCTCAT CGTTACTGGC GAAGTAGACG AAAATCTGTT CTTAGCTGCG
CGTAACCTGT ACAAAGTTGA CGTGCGTGAC GTAACTGGTA TCGACCCAGT AAGCCTGATC
GCATTTGACA AGGTTCTAAT GACTGCTGCT GCAGTTAAGC AAGTTGAGGA GATGCTGGCA
TGA
 
Protein sequence
MELMVKGANA LTVSETTFGR EFNEALVHQV VVAYAAGARQ GTRAQKTRSE VSGGGAKPWR 
QKGTGRARAG TIRSPIWRTG GVTFAAKPQD HSQKVNKKMY RGAMKSILSE LVRQERLIVV
ENFSVEAPKT KALVAKLKEL ELNDVLIVTG EVDENLFLAA RNLYKVDVRD VTGIDPVSLI
AFDKVLMTAA AVKQVEEMLA