| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2171 |
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| Symbol | rplB |
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| ID | 5135504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2315947 |
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| End bp | 2316771 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533627 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001218087 |
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| Protein GI | 147675192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000003452 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG TTAAATGTAA GCCGACTTCG GCTGGTCGTC GTCACGTTGT TAAAGTTGTT
AACGCTGACC TGCACAAGGG TAAGCCATAC GCACCTCTTC TAGAGAAAAA CTCTAAGAAC
GGTGGTCGTA ACAACAACGG TCGTATCACA GTACGTCACA TCGGTGGTGG CCACAAGCAA
CACTACCGTT TGGTTGACTT CAAACGTACT AAAGACGGTA TCCCAGCGAA AGTTGAGCGT
CTAGAATACG ATCCAAACCG TAGCGCAAAC ATCGCTCTAG TTCTGTACGC AGACGGTGAG
CGTCGTTACA TCATTGCACC GAAAGGTCTG CAAGCGGGTG ACGTTATCCA ATCTGGCCCA
GATGCGCCGA TCAAAGCGGG TAACGCAATG CCAATGCGCA ACATCCCAGT TGGTTCAACA
ATCCACAACG TTGAATTGAC TCCAGGAAAA GGCGCTCAGC TGGCTCGTTC TGCTGGTGCT
TACGCGCAAC TTGTTGCTCG TGATGGTGCA TACGTGACCC TACGTCTACG TTCTGGCGAA
ATGCGTAAAG TACTGTCTGA AGGCCGTGCA ACTATCGGTG AAGTAGGCAA CGCTGAGCAC
ATGCTGCGTG AACTAGGTAA AGCTGGTGCA GCACGCTGGC GCGGTGTTCG TCCAACCGTT
CGCGGTGTGG TAATGAACCC GGTTGACCAC CCACACGGTG GTGGTGAAGG CCGTACTTCT
GGTGGTCGTC ACCCAGTATC TCCTTGGGGC GTTCCAACCA AAGGCTACAA GACACGTAGT
AACAAACGCA CTGACAAGTA CATCGTACGT CGTCGTAATA AGTAA
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| Protein sequence | MAIVKCKPTS AGRRHVVKVV NADLHKGKPY APLLEKNSKN GGRNNNGRIT VRHIGGGHKQ
HYRLVDFKRT KDGIPAKVER LEYDPNRSAN IALVLYADGE RRYIIAPKGL QAGDVIQSGP
DAPIKAGNAM PMRNIPVGST IHNVELTPGK GAQLARSAGA YAQLVARDGA YVTLRLRSGE
MRKVLSEGRA TIGEVGNAEH MLRELGKAGA ARWRGVRPTV RGVVMNPVDH PHGGGEGRTS
GGRHPVSPWG VPTKGYKTRS NKRTDKYIVR RRNK
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